Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq82 127 1e-24 seq41 125 5e-24 seq232 120 2e-22 seq142 93.3 3e-14 seq120 93.3 3e-14 seq2 89.7 4e-13 seq67 84.2 2e-11 >seq82 Length=265081 Score = 127 bits (140), Expect = 1e-24 Identities = 169/233 (73%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 || || |||||||| ||||| | ||||| ||| |||||| | |||||||| | Sbjct 263232 ATTCAGATTTTTGTCAAAACCTTGACTGGAAAAACTATTACGCTCGATGTCGAGCCGTCG 263173 Query 27850 GAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| ||| | ||| ||||| || || ||||| |||||| |||| ||| | Sbjct 263172 GACACGATTGATAAT--GTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCTCCGGACC 263115 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 ||||||| | |||||||||||||| || ||||| || | ||||| ||| |||||||| Sbjct 263114 AGCAACGTCTCATTTTTGCCGGAAAGCAGTTGGAGGATGGACGCACTTTGAGCGATTACA 263055 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGCGAC 28020 | || ||||| || || ||||||||| | || ||||| ||||| || ||| || Sbjct 263054 ATATTCAAAAGGAAAGTACTTTGCATCTTGTCTTGCGATTGCGCGGTGGCCAC 263002 >seq41 Length=265118 Score = 125 bits (138), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 || || ||||| || ||||| | || || ||| |||||| | |||||||| | Sbjct 262952 ATTCAGATTTTCGTCAAAACCTTGACCGGCAAAACTATTACGCTCGATGTCGAGCCGTCG 262893 Query 27850 GAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| ||| | ||| ||||| || || ||||| |||||| ||||| ||| | Sbjct 262892 GACACGATCGATAAT--GTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCGCCGGACC 262835 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 ||||||| | |||||||||||||| || ||||| || | ||||| ||| |||||||| Sbjct 262834 AGCAACGTCTCATTTTTGCCGGAAAGCAGTTGGAGGATGGACGCACTTTGAGCGATTACA 262775 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 | || ||||| || || ||||||||| | |||||||| ||||| || ||| Sbjct 262774 ATATTCAAAAGGAAAGTACTTTGCATCTCGTTTTGCGATTGCGCGGTGGC 262725 >seq232 Length=134552 Score = 120 bits (132), Expect = 2e-22 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 || || ||||| || |||||| | || || ||| |||||| |||| ||||| | Sbjct 133269 ATTCAGATTTTCGTCAAAACTTTGACCGGAAAAACTATTACGCTTGACGTCGAGCCGTCG 133210 Query 27850 GAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| ||| | ||| ||||| ||||| ||||| |||||| |||| ||| | Sbjct 133209 GACACGATCGATAAT--GTCAAGACCAAAATCCAAGACAAGGAAGGTATTCCTCCGGACC 133152 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 ||||||| | ||||||||||| || || ||||| || | ||||| || |||||||| Sbjct 133151 AGCAACGTCTCATTTTTGCCGGTAAGCAGTTGGAAGATGGACGCACTTTAAGCGATTACA 133092 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 | || ||||| || |||||||||||| | ||| |||| ||||| || || Sbjct 133091 ATATTCAAAAGGAAAGCACTTTGCATCTTGTTCTGCGATTGCGCGGTGG 133043 >seq142 Length=241092 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || || |||| ||| || ||||| || ||||| ||||| ||||||||||| Sbjct 170450 GACAAGGAGGGAATTCCCCCGGATCAACAACGATTGATTTTCGCCGGTAAACAATTGGAA 170391 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | ||| | ||| |||||||| || |||||||| ||| ||||| ||||||||| Sbjct 170390 GATGGACGTACTTTGAGTGATTACAATATTCAAAAAGAATCCACCTTGCACTTGGTTTTG 170331 Query 28003 CGTTTGCGTGGCGG 28016 ||| | || || || Sbjct 170330 CGTCTCCGAGGTGG 170317 >seq120 Length=609189 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || || |||| ||| || || || | ||||| ||||||||||| ||||| Sbjct 561877 GACAAGGAGGGAATTCCTCCGGATCAACAGCGTCTGATTTTCGCCGGAAAACAGTTGGAA 561936 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | || | ||||||||||||||||||| ||||| || |||||||||||| | Sbjct 561937 GATGGTCGAACACTGTCCGATTACAACATCCAGAAAGAATCGACCTTGCATTTGGTTCTC 561996 Query 28003 CGTTTGCGTGGCGG 28016 || |||||||| || Sbjct 561997 CGATTGCGTGGTGG 562010 >seq2 Length=622807 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || || |||| ||| || || || || ||||| ||||||||||| ||||| Sbjct 352981 GACAAGGAGGGAATTCCTCCGGATCAACAGCGTTTGATTTTCGCCGGAAAACAGTTGGAA 352922 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | || | ||||||| |||||||| || ||||| || |||||||||||| | Sbjct 352921 GATGGTCGAACACTGTCCGACTACAACATTCAGAAAGAATCGACCTTGCATTTGGTTCTC 352862 Query 28003 CGTTTGCGTGGCGG 28016 || |||||||| || Sbjct 352861 CGATTGCGTGGTGG 352848 >seq67 Length=439500 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || || |||| ||| || ||||| || ||||| ||||| ||||||||||| Sbjct 2976 GACAAGGAGGGAATTCCCCCGGATCAACAACGATTGATTTTCGCCGGTAAACAATTGGAA 2917 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | ||| | ||| |||||||| || || ||||| || ||||| ||||||||| Sbjct 2916 GATGGACGTACGTTGAGTGATTACAATATTCAGAAAGAATCTACCTTGCACTTGGTTTTG 2857 Query 28003 CGTTTGCGTGGCGG 28016 ||| | || || || Sbjct 2856 CGTCTTCGAGGTGG 2843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355861120563465