Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq226 165 2e-35 seq120 145 2e-29 seq2 132 1e-25 seq142 125 2e-23 seq67 120 7e-22 seq232 111 4e-19 seq82 104 5e-17 seq41 91.5 3e-13 seq10 91.5 3e-13 >seq226 Length=603765 Score = 165 bits (182), Expect = 2e-35 Identities = 161/205 (79%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATCTTCCAGCT 210969 ||||||||| ||||| || |||||||| || || | ||| | | | || || || |||| Sbjct 85649 GTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAACG-TGCGGCCGTCCTCGAGCT 85707 Query 210970 GCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCT 211029 |||| || || ||||| | || ||||| ||||| |||| |||||||||||||||||||| Sbjct 85708 GCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTTCCTTGTCCTGGATCT 85767 Query 211030 TTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCG 211089 | || ||||| ||||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct 85768 TGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGGGTGATGGTCTTTCCGG 85827 Query 211090 TGAGAGTCTTTACAAACACCTGCAT 211114 | | |||||| || || | |||||| Sbjct 85828 TCAAAGTCTTGACGAAAATCTGCAT 85852 Score = 165 bits (182), Expect = 2e-35 Identities = 161/205 (79%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATCTTCCAGCT 210969 ||||||||| ||||| || |||||||| || || | ||| | | | || || || |||| Sbjct 85877 GTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAACG-TGCGGCCGTCCTCGAGCT 85935 Query 210970 GCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCT 211029 |||| || || ||||| | || ||||| ||||| |||| |||||||||||||||||||| Sbjct 85936 GCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTTCCTTGTCCTGGATCT 85995 Query 211030 TTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCG 211089 | || ||||| ||||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct 85996 TGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGGGTGATGGTCTTTCCGG 86055 Query 211090 TGAGAGTCTTTACAAACACCTGCAT 211114 | | |||||| || || | |||||| Sbjct 86056 TCAAAGTCTTGACGAAAATCTGCAT 86080 >seq120 Length=609189 Score = 145 bits (160), Expect = 2e-29 Identities = 151/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || ||||| |||||||| ||||| | || || | |||||||||| ||| || || Sbjct 561980 GTCGATTCTTTCTGGATGTTGTAATCGGACAGTGTTCGACCATCTTCCAACTGTTTTCCG 561921 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 ||||| || || || ||||| || ||||||| ||| ||||||||||||||||| || Sbjct 561920 GCGAAAATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCCTGGATCTTGGTCTTG 561861 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || || ||||| |||||||| || || ||||| ||||| ||||| ||||| | ||| Sbjct 561860 ACATTATCGATAGTGTCAGACGGCTCGACATCGAGCGTGATGGTCTTACCCGTCAAGGTC 561801 Query 211098 TTTACAAACACCTGCATT 211115 ||||| || | |||||| Sbjct 561800 TTTACGAAGATTTGCATT 561783 >seq2 Length=622807 Score = 132 bits (146), Expect = 1e-25 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || ||||| || ||||| || || | || || | |||||||||| ||| || || Sbjct 352878 GTCGATTCTTTCTGAATGTTGTAGTCGGACAGTGTTCGACCATCTTCCAACTGTTTTCCG 352937 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 ||||| || | || ||||| || ||||||| ||| ||||||||||||||||| || Sbjct 352938 GCGAAAATCAAACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCCTGGATCTTGGTCTTG 352997 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || || ||||| |||||||| || || ||||| ||||| ||||| ||||| | ||| Sbjct 352998 ACATTATCGATAGTGTCAGACGGCTCGACATCGAGCGTGATGGTCTTACCCGTCAAGGTC 353057 Query 211098 TTTACAAACACCTGCATT 211115 ||||| || | |||||| Sbjct 353058 TTTACGAAGATTTGCATT 353075 >seq142 Length=241092 Score = 125 bits (138), Expect = 2e-23 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976 ||||| |||||||| || || ||||| | ||| | | | ||||||||||| || || || Sbjct 170347 GTGGATTCTTTTTGAATATTGTAATCACTCAAAG-TACGTCCATCTTCCAATTGTTTACC 170405 Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036 ||||| || | |||||||| || || |||| ||| |||||||| |||||||| || Sbjct 170406 GGCGAAAATCAATCGTTGTTGATCCGGGGGAATTCCCTCCTTGTCTTGGATCTTGGTCTT 170465 Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096 ||||| ||||| || || || ||||| || || || || ||||| ||||| || || Sbjct 170466 GACGTTGTCGATCGTATCCGAAGGCTCAACGTCCAGGGTAATGGTCTTACCCGTCAGTGT 170525 Query 211097 CTTTACAAACACCTGCAT 211114 |||||| || | ||||| Sbjct 170526 CTTTACGAAAATTTGCAT 170543 >seq67 Length=439500 Score = 120 bits (132), Expect = 7e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976 || || ||||| || || || ||||| | ||| | | | ||||||||||| || || || Sbjct 2873 GTAGATTCTTTCTGAATATTGTAATCACTCAACG-TACGTCCATCTTCCAATTGTTTACC 2931 Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036 ||||| || | |||||||| || || |||| ||| |||||||| |||||||| || Sbjct 2932 GGCGAAAATCAATCGTTGTTGATCCGGGGGAATTCCCTCCTTGTCTTGGATCTTGGTCTT 2991 Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096 ||||| ||||| ||||| || ||||| || || || || ||||| ||||| || || Sbjct 2992 GACGTTGTCGATCGTGTCCGACGGCTCAACGTCCAGGGTAATGGTCTTACCCGTCAGTGT 3051 Query 211097 CTTTACAAACACCTGCAT 211114 |||||| || | ||||| Sbjct 3052 CTTTACGAAAATTTGCAT 3069 >seq232 Length=134552 Score = 111 bits (122), Expect = 4e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| || | |||| || ||||| || || ||||| | || | ||||||| Sbjct 133058 AGAACAAGATGCAAAGTGCTTTCCTTTTGAATATTGTAATCGCTTAAAGTGCGTCCATCT 133117 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| |||||| || || || || || ||||| ||||| ||||||| ||||||||||| Sbjct 133118 TCCAACTGCTTACCGGCAAAAATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTTGTCT 133177 Query 211023 TGGATCTTTTGT-TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 ||||| ||| || || || || ||||| ||||| || || || || || || || || Sbjct 133178 TGGAT-TTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCGACGTCAAGCGTAATAGT 133236 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || | ||| || || || | ||| || Sbjct 133237 TTTTCCGGTCAAAGTTTTGACGAAAATCTGAAT 133269 >seq82 Length=265081 Score = 104 bits (114), Expect = 5e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATCTT 210963 |||||| || | ||| || ||||| || || ||||| | ||| | | | |||||| | Sbjct 263023 GACAAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTCAAAG-TGCGTCCATCCT 263081 Query 210964 CCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCT 211023 ||| |||||| || || || || || ||||| ||||| ||||||| ||||||||||| | Sbjct 263082 CCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTTGTCTT 263141 Query 211024 GGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCT 211083 | ||||| || || || || || ||||| || || || ||||| || || || | Sbjct 263142 GAATCTTGGTCTTGACATTATCAATCGTGTCCGACGGCTCGACATCGAGCGTAATAGTTT 263201 Query 211084 TTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||| || | || || ||||| | ||| || Sbjct 263202 TTCCAGTCAAGGTTTTGACAAAAATCTGAAT 263232 >seq41 Length=265118 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 210924 TCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAA 210982 || ||||| || || ||||| | ||| | | | |||||| |||| |||||| || || || Sbjct 262762 TCCTTTTGAATATTGTAATCGCTCAAAG-TGCGTCCATCCTCCAACTGCTTTCCGGCAAA 262820 Query 210983 GATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTT 211042 || || ||||| ||||| || |||| ||||||||||| || ||||| || || || Sbjct 262821 AATGAGACGTTGCTGGTCCGGCGGAATACCTTCCTTGTCTTGAATCTTGGTCTTGACATT 262880 Query 211043 TTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102 ||||| ||||| || || || ||||| || || || || || || | || || || Sbjct 262881 ATCGATCGTGTCCGACGGCTCGACATCGAGCGTAATAGTTTTGCCGGTCAAGGTTTTGAC 262940 Query 211103 AAACACCTGCAT 211114 || | ||| || Sbjct 262941 GAAAATCTGAAT 262952 >seq10 Length=152390 Score = 91.5 bits (100), Expect = 3e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 178216 TCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATCGAG 178275 |||||| | || ||||||| ||| | | |||||||||| | ||| ||| ||| | || Sbjct 133594 TCCTTCCTGTTCATACTTTTCGTACAACGCCTCGAATTCGGCTCCGTAGCAATCGGCAAG 133535 Query 178276 ACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTTCAT 178335 ||||| ||||||||||||||||| | |||||| || |||||| ||||| ||||| Sbjct 133534 TCCGGGCGCCTCATTGGGGCAGAACAAACTCCAAGTGGAGTTTTCCTTGACTCGCTTCAT 133475 Query 178336 GAA 178338 ||| Sbjct 133474 GAA 133472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159147618767675