Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq232 149 1e-30 seq41 136 9e-27 seq142 134 3e-26 seq226 129 1e-24 seq82 129 1e-24 seq67 129 1e-24 >seq232 Length=134552 Score = 149 bits (164), Expect = 1e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 || ||| ||||| || | |||| ||| ||||| | |||||||||| ||||| | || Sbjct 133054 TCGCAGAACAAGATGCAAAGTGCTTTCCTTTTGAATATTGTAATCGCTTAAAGTGCGTCC 133113 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | |||||| || || || || || ||||| ||||| || |||||||||||||| Sbjct 133114 ATCTTCCAACTGCTTACCGGCAAAAATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTT 133173 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||||||||| || ||| ||| ||||| ||||| || | || ||||| | ||| || Sbjct 133174 GTCTTGGATTTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCGACGTCAAGCGTAAT 133233 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAA 225704 || || || ||||||||||| | ||| Sbjct 133234 AGTTTTTCCGGTCAAAGTTTTGACGAA 133260 >seq41 Length=265118 Score = 136 bits (150), Expect = 9e-27 Identities = 140/183 (77%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 225522 TTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAA 225581 ||| ||||| | |||||||||| |||||| | ||||| || | |||||| || || || Sbjct 262761 TTCCTTTTGAATATTGTAATCGCTCAAAGTGCGTCCATCCTCCAACTGCTTTCCGGCAAA 262820 Query 225582 GATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGC 225641 || || ||||| ||||| ||||||||||||||||||||||| ||||| ||| ||| Sbjct 262821 AATGAGACGTTGCTGGTCCGGCGGAATACCTTCCTTGTCTTGAATCTTGGTCTTGACATT 262880 Query 225642 TTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTAT 225701 ||||| ||||| || | || || || | ||| || || ||||| ||||| ||||| | Sbjct 262881 ATCGATCGTGTCCGACGGCTCGACATCGAGCGTAATAGTTTTGCCGGTCAAGGTTTTGAC 262940 Query 225702 GAA 225704 ||| Sbjct 262941 GAA 262943 >seq142 Length=241092 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 |||||||||||||| | ||||||||| |||||| | |||||||| | || || || Sbjct 170347 GTGGATTCTTTTTGAATATTGTAATCACTCAAAGTACGTCCATCTTCCAATTGTTTACCG 170406 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 ||||| || | ||||||||| || || ||||| || ||||||||||||||||| ||| Sbjct 170407 GCGAAAATCAATCGTTGTTGATCCGGGGGAATTCCCTCCTTGTCTTGGATCTTGGTCTTG 170466 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 || ||||| || || || | || ||||| | || || ||||| ||||||| || Sbjct 170467 ACGTTGTCGATCGTATCCGAAGGCTCAACGTCCAGGGTAATGGTCTTACCCGTCAGTGTC 170526 Query 225697 TTTATGAACACTTGCAT 225713 |||| ||| | |||||| Sbjct 170527 TTTACGAAAATTTGCAT 170543 >seq226 Length=603765 Score = 129 bits (142), Expect = 1e-24 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| ||||| || || || |||| ||||| ||| ||| || | || || || ||||| Sbjct 85649 GTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAACGTGCGGCCGTCCTCGAGCTG 85708 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| || || ||||| | || ||||| || |||||||| ||||||||||| |||||||| Sbjct 85709 CTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTTCCTTGTCCTGGATCTT 85768 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||| || ||||||||||| |||| || || || | ||||| ||||| || || Sbjct 85769 GGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGGGTGATGGTCTTTCCGGT 85828 Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713 |||||| || | ||| | ||||| Sbjct 85829 CAAAGTCTTGACGAAAATCTGCAT 85852 Score = 129 bits (142), Expect = 1e-24 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| ||||| || || || |||| ||||| ||| ||| || | || || || ||||| Sbjct 85877 GTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAACGTGCGGCCGTCCTCGAGCTG 85936 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| || || ||||| | || ||||| || |||||||| ||||||||||| |||||||| Sbjct 85937 CTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTTCCTTGTCCTGGATCTT 85996 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||| || ||||||||||| |||| || || || | ||||| ||||| || || Sbjct 85997 GGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGGGTGATGGTCTTTCCGGT 86056 Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713 |||||| || | ||| | ||||| Sbjct 86057 CAAAGTCTTGACGAAAATCTGCAT 86080 >seq82 Length=265081 Score = 129 bits (142), Expect = 1e-24 Identities = 149/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 || || |||||| || | ||| ||| ||||| | |||||||||| |||||| | || Sbjct 263017 TCGCAAGACAAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTCAAAGTGCGTCC 263076 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| || | |||||| || || || || || ||||| ||||| || |||||||||||||| Sbjct 263077 ATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTT 263136 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| ||||| ||| ||| || || ||||| || | || || || | ||| || Sbjct 263137 GTCTTGAATCTTGGTCTTGACATTATCAATCGTGTCCGACGGCTCGACATCGAGCGTAAT 263196 Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698 || || || ||||| ||||| Sbjct 263197 AGTTTTTCCAGTCAAGGTTTT 263217 >seq67 Length=439500 Score = 129 bits (142), Expect = 1e-24 Identities = 161/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | || || | ||| | || |||||||| || | ||||||||| ||| || Sbjct 2849 CGAAGACGCAAAACCAAGTGCAAGGTAGATTCTTTCTGAATATTGTAATCACTCAACGTA 2908 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | |||||||| | || || || ||||| || | ||||||||| || || ||||| || Sbjct 2909 CGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGAATTCCC 2968 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||||||||||| ||| || ||||| ||||| || | || ||||| | Sbjct 2969 TCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGGCTCAACGTCCAGG 3028 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| ||||||| || |||| ||| | |||||| Sbjct 3029 GTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCAT 3069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192526692604730