Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq128 125 6e-24 seq61 122 7e-23 >seq128 Length=686783 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29597 TTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCC 29656 || ||| | || ||||||| |||| ||||| | |||||| || | | | | ||| Sbjct 551764 TTGATCTTGAGCTTGGGAAACGGTCGAGGCTCACGCTCGAGTTGCTCCTTTAAGGCATCC 551823 Query 29657 ACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGC 29716 || || | | |||| ||| ||||| || | | ||| |||||||||||||| | | | Sbjct 551824 ACATGATTCAAATAGATGTGCGCATCGCCAATGACGTGAACAAACTCTCCCGGCTTTCGT 551883 Query 29717 CCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACC 29776 || ||||| ||||| ||||||| ||| | ||||| |||||| || ||||| || || || Sbjct 551884 CCCGTGACTTGAGCAATCATGTGCGTCAAGAGAGCGTAGCTCGCAATGTTGAACGGTACT 551943 Query 29777 CCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTC 29823 ||||| ||||||||| | | ||| || | ||| |||||||| || Sbjct 551944 CCGAGTCCCATGTCCGCACTGCGCTGATACAACTGACACGAGAGTTC 551990 >seq61 Length=553271 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29597 TTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCC 29656 || ||| | || ||||||| || | ||||| | |||||| || ||| | ||| Sbjct 19105 TTGATCTTGAGCTTGGGAAACGGCCGAGGCTCGCGCTCGAGTTGCTCTTTCAAAGCATCC 19046 Query 29657 ACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGC 29716 || || | | |||| || ||||| || | | ||| |||||||||||||||| | | Sbjct 19045 ACATGATTCAAATAGATATGCGCATCGCCAATGACGTGAACAAACTCTCCCGGTTTTCGT 18986 Query 29717 CCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACC 29776 || || |||||||| ||||||| ||| | ||||| |||||| || ||||| || || || Sbjct 18985 CCCGTAACGTGAGCGATCATGTGCGTCAAGAGAGCGTAGCTCGCAATGTTGAACGGAACT 18926 Query 29777 CCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTC 29823 || |||||||||||| | | ||| || | ||| |||||||| || Sbjct 18925 CCAAGCCCCATGTCCGCACTACGCTGATACAACTGACACGAGAGTTC 18879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406161739716370