Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq232 107 4e-18 seq41 100 7e-16 seq120 98.7 2e-15 seq226 95.1 3e-14 seq82 93.3 1e-13 >seq232 Length=134552 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || |||||||| | ||| || ||||| || ||||||||| |||||| | |||||| Sbjct 133058 AGAACAAGATGCAAAGTGCTTTCCTTTTGAATATTGTAATCGCTTAAAGTGCGTCCATCT 133117 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || ||||| || || || | |||||||||| | || |||||||| ||| Sbjct 133118 TCCAACTGCTTACCGGCAAAAATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTTGTCT 133177 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| |||||| | || | |||| || ||| || ||||| ||||||||| Sbjct 133178 TGGATTTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCGACGTCAAGCGTAATAGTT 133237 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || | ||| || ||||| | ||| || Sbjct 133238 TTTCCGGTCAAAGTTTTGACGAAAATCTGAAT 133269 >seq41 Length=265118 Score = 100 bits (110), Expect = 7e-16 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || ||||| | |||| || ||||| || ||||||||| ||||| | ||||| || Sbjct 262744 ACGAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTCAAAGTGCGTCCATCCTCC 262803 Query 151956 AG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTT 152013 | ||||| ||||| || || || | |||||||||| || || |||||||| |||| Sbjct 262804 AACTGCTTT--CCGGCAAAAATGAGACGTTGCTGGTCCGGCGGAATACCTTCCTTGTCTT 262861 Query 152014 GAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTT 152073 |||| || |||||| | || | |||| || ||| || || || |||||||||| Sbjct 262862 GAATCTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCGACATCGAGCGTAATAGTTT 262921 Query 152074 TGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| || | || || ||||| | ||| || Sbjct 262922 TGCCGGTCAAGGTTTTGACGAAAATCTGAAT 262952 >seq120 Length=609189 Score = 98.7 bits (108), Expect = 2e-15 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 || ||| || | ||| | || || ||||| |||||||||||||||| | |||| || Sbjct 561999 TCGGAGAACCAAATGCAAGGTCGATTCTTTCTGGATGTTGTAATCGGACAGTGTTCGACC 561940 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||| | ||| |||||||| || || | ||| || |||| | ||||| ||||| Sbjct 561939 ATCTTCCAACTGTTTTCCGGCGAAAATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTT 561880 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || || || || |||||| | || | |||| || ||| || || || || || Sbjct 561879 GTCCTGGATCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGACATCGAGCGTGAT 561820 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || ||||| | ||||| ||||||| |||||| Sbjct 561819 GGTCTTACCCGTCAAGGTCTTTACGAAGATTTGCATT 561783 >seq226 Length=603765 Score = 95.1 bits (104), Expect = 3e-14 Identities = 149/210 (71%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||||||||| || ||||||||||| ||| || || | || || || | Sbjct 85646 CAAG-TGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAACGTGCGGCCGTCCTCGA 85704 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| ||||| ||||| | | ||| || || | || ||||||||||| || || Sbjct 85705 GCTGCTTT--CCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTTCCTTGTCCTG 85762 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || || ||||| | || | | |||| || ||| || || || || || || || Sbjct 85763 GATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGGGTGATGGTCTT 85822 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || | |||||| ||||| | |||||| Sbjct 85823 TCCGGTCAAAGTCTTGACGAAAATCTGCAT 85852 Score = 95.1 bits (104), Expect = 3e-14 Identities = 149/210 (71%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||||||||| || ||||||||||| ||| || || | || || || | Sbjct 85874 CAAG-TGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAACGTGCGGCCGTCCTCGA 85932 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| ||||| ||||| | | ||| || || | || ||||||||||| || || Sbjct 85933 GCTGCTTT--CCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTTCCTTGTCCTG 85990 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || || ||||| | || | | |||| || ||| || || || || || || || Sbjct 85991 GATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGGGTGATGGTCTT 86050 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || | |||||| ||||| | |||||| Sbjct 86051 TCCGGTCAAAGTCTTGACGAAAATCTGCAT 86080 >seq82 Length=265081 Score = 93.3 bits (102), Expect = 1e-13 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 ||||||||| | |||| || ||||| || ||||||||| ||||| | ||||| || Sbjct 263023 GACAAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTCAAAGTGCGTCCATCCTC 263082 Query 151955 TAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 | ||||| ||||| || || || | |||||||||| | || |||||||| ||| Sbjct 263083 CAACTGCTTT--CCGGCAAAAATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTTGTCT 263140 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || |||||| | || | |||| || ||| || || || ||||||||| Sbjct 263141 TGAATCTTGGTCTTGACATTATCAATCGTGTCCGACGGCTCGACATCGAGCGTAATAGTT 263200 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || | || || || || | ||| || Sbjct 263201 TTTCCAGTCAAGGTTTTGACAAAAATCTGAAT 263232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153816438917945