Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq194 181 1e-40 seq98 161 1e-34 seq208 105 7e-18 seq103 93.3 4e-14 >seq194 Length=282305 Score = 181 bits (200), Expect = 1e-40 Identities = 358/530 (68%), Gaps = 0/530 (0%) Strand=Plus/Plus Query 23501 ACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAA 23560 |||| ||||| |||||||||||||| || ||||| || | ||| ||||||||||| |||| Sbjct 115790 ACAACAAACAGGCAAAATCACAATGCAGACCTTCGTCGCGACTGATCAATTCATTGGAAA 115849 Query 23561 ATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGG 23620 | | || ||||| | || ||||| || | ||| || || ||| || || |||| Sbjct 115850 AGCAGAGACCGGGCATAAGACCCCGTTTCTTGAGCCAGAAAATGGCACAGAACGAGCCGG 115909 Query 23621 AAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTAT 23680 |||||||||| || || || |||||||| || || |||| |||| | |||| | Sbjct 115910 AAAAGAAAATGCCTTCGACGGCCGCAAATGCGACGCAACGTTCGGCAAAGGAAGCATGGT 115969 Query 23681 AATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAA 23740 | | ||||| | ||| || |||||| || ||||||| | || |||| Sbjct 115970 TGGCGTCACACCATTGCAAGGCCCAGTTGGCCTTCTTTTGTACACACGGGACCGTATCAA 116029 Query 23741 TTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAAC 23800 | || || | | | |||||| | || || || |||||||| ||||| Sbjct 116030 TGGCCCGCAACAAATGATCTTTTTCCTTGGGGTCACGAATGTAGGTATCAATGAGTAACG 116089 Query 23801 TATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTT 23860 ||| | ||| |||||| ||||| | ||||| || || ||||||||||| | |||| Sbjct 116090 AGTACGTCTCACTATGAATGTTTTCGACGGCAATTTGGAATCCATAAAAACAGCGGGCTT 116149 Query 23861 CAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCAC 23920 | | |||||| || || |||| ||| || |||||||| || |||||||| || Sbjct 116150 CTGGTGATTGAATTTCGGTACAAAAGTTTTGCGCCAAATTTTCATTCACAATACCGTCCG 116209 Query 23921 TAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTT 23980 || |||||||| || | ||| | | | ||| |||| ||| | | || || || | Sbjct 116210 AGGCGGCAAAGAACGCCAAAACGTGTGACACAAAGTGTCGTTCGTTGCTGGACAAATTCT 116269 Query 23981 TCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAA 24030 ||||||| | | ||| | | ||||||| ||| || | ||||| ||| Sbjct 116270 TCCAATCTTGCAAATCACTGGCCAAATCAATTTCTTCGGCCGTCCAGAAA 116319 >seq98 Length=427084 Score = 161 bits (178), Expect = 1e-34 Identities = 353/529 (67%), Gaps = 0/529 (0%) Strand=Plus/Plus Query 23501 ACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAA 23560 ||| || ||| |||||||||||||| || ||||| || | |||||||||||| || |||| Sbjct 135029 ACAGTAGACAGGCAAAATCACAATGCAGACCTTCGTCGCGACTAATCAATTCGTTGGAAA 135088 Query 23561 ATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGG 23620 | | || ||||| | || ||||| || | |||||| || ||| ||| || |||| Sbjct 135089 AGCAAAGACCGGGCATGAGACCCCGTTTCTTGAGCCAAAAAATGGCACAAAAGGAACCGG 135148 Query 23621 AAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTAT 23680 |||||||||| || || || ||||||||||| ||| ||| |||| | || || | Sbjct 135149 AAAAGAAAATGCCTTCGACGGCCGCAAAGGCGACACAGCGTTCCGCAAAGGAAGCGTTGT 135208 Query 23681 AATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAA 23740 | | ||||| | ||||| |||||| || ||||||| || || |||| Sbjct 135209 TCGCGTCACACCATTGCAAGGCCCAATGGGCCTTCTTTTGTACACACGGAACCGTATCAA 135268 Query 23741 TTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAAC 23800 | || || | | | || |||| ||| || || |||||||| | | | Sbjct 135269 TGGCCCGCAACAAATGATCCTTCTCTTTCGGATCGCGAATGTACGTATCAATCAAAAGAG 135328 Query 23801 TATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTT 23860 ||| |||| ||||| ||||| | ||||| || || || |||||||| | |||| Sbjct 135329 AATAGGTTTCGCTGTGAATGTTTTCGACGGCAATTTGGAATCCGTAAAAACAACGGGCTT 135388 Query 23861 CAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCAC 23920 | | | |||||| || || |||| ||| || |||||||| || ||||| || || Sbjct 135389 CCGGCGATTGAATTTCGGTACAAAAGTTTTGTGCCAAATTTTCATTCACAATGCCGTCGG 135448 Query 23921 TAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTT 23980 || |||||||| || | || | | ||| || | ||| | | || || | || Sbjct 135449 ACGCGGCAAAGAACGCCAACACGTGCGACACAAAGTGACGTTCGTTGCTCGACAAATGTT 135508 Query 23981 TCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 ||||||| | | ||| | | | ||||| ||| || | |||||||| Sbjct 135509 TCCAATCTTGCAAATCACTGGCGAGATCAATTTCTTCGGCCGTCCAAAA 135557 >seq208 Length=180812 Score = 105 bits (116), Expect = 7e-18 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568 || ||||| ||| || || |||||||| | |||||| | ||||||| ||| || || Sbjct 73056 CAGGCAAACGAACAGTGCAGTCCTTCATCGCGACTAATGAGTTCATTACTAAACGTCAAA 72997 Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628 || ||||| | |||||||| || | |||||| || ||| ||| | ||| |||||||| Sbjct 72996 CCGGGCATCAGCCCTCGTTTCTTGAGCCAAAAGATGGCACAAAAAGCTCCCGAAAAGAAG 72937 Query 23629 ATACCCTCAACAGCCGCAAAGGCCAC 23654 || || || || |||||||||||||| Sbjct 72936 ATCCCTTCCACGGCCGCAAAGGCCAC 72911 Score = 86.0 bits (94), Expect = 7e-12 Identities = 206/309 (67%), Gaps = 2/309 (1%) Strand=Plus/Minus Query 23776 GTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATC 23835 || || || |||||||| || | || || |||| |||||| |||| || || || Sbjct 72792 GTAATGTACGTATCAATAAGAAGACAGTAGGTTTCTTGATGAATGCTTTCCATGGCCATT 72733 Query 23836 TGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCT 23895 || || ||||||||||| | ||||| | | || || | |||||| || || Sbjct 72732 TGGAATCCATAAAAACAGCGGGCTTCCGGGACCGTCACTTCCCGACAAAATCGTTCCGCC 72673 Query 23896 AAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAG-CAAGAACATATTTTATAAA 23954 |||||||| ||||||||||| | |||||||||| | ||||| |||| | || || Sbjct 72672 AAATTTTCCACCACAATACCATCGGCACCAGCAAAGAAGGCCAAGACCATA-CTGATGAA 72614 Query 23955 ATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTC 24014 ||||| ||| | | ||| || |||||| ||| ||| | | ||||| ||| Sbjct 72613 ATGTCGTTCGGATGACGTTAAGGATTGCCAATCGGTAACATCCTGACTGAGATCAATTTC 72554 Query 24015 ATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTG 24074 || | |||||||| |||| | |||| ||||| ||| | ||| |||||| Sbjct 72553 GTCGGCCGTCCAAAACGAAGCCACGTGTTGCTTGTACATGTTCCACAAATCGGCATGTTG 72494 Query 24075 TATTGGAAA 24083 || ||||| Sbjct 72493 AATGGGAAA 72485 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/96 (81%), Gaps = 6/96 (6%) Strand=Plus/Minus Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264 ||| ||||| | |||||||||||||| || ||| |||||||||| |||||||| ||||| Sbjct 73360 CATGACACCACTCTTTTGATATTCCCCGACTCGTTTTTCGAAAAAGTTTGTCTTTCCCTC 73301 Query 23265 TAA--TGAT-ATATTTTCCATAAAATCAAATGGATT 23297 || |||| |||| |||| ||||||||||||| Sbjct 73300 CAAACTGATCATAT---CCATCCAATCAAATGGATT 73268 >seq103 Length=133562 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568 || ||||| ||| || | |||||||| | |||||| | |||||| || || ||| Sbjct 27655 CAGGCAAACGAACAGTGCAATCCTTCATCACGACTAATGAGTTCATTGCTGAACGTCAAT 27596 Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628 || ||||| | ||| ||||| || | |||||| || ||| ||| | || |||||||| Sbjct 27595 CCGGGCATGAGTCCCCGTTTCTTGAGCCAAAAAATGGCACAAAAGGCGCCCGAAAAGAAG 27536 Query 23629 ATACCCTCAACAGCCGCAAAGGCCAC 23654 || || || || |||||||||||||| Sbjct 27535 ATGCCTTCCACGGCCGCAAAGGCCAC 27510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521486077013000