Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq226 127 1e-24 seq120 102 6e-17 seq2 98.7 7e-16 >seq226 Length=603765 Score = 127 bits (140), Expect = 1e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 ||||| || | || | |||||||| |||||| || |||||| ||||||||||| ||| Sbjct 85623 ATTCCACCGCGGAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCG 85682 Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 | ||| |||| || |||||||| |||||||||||||||||||| ||||| | Sbjct 85683 CTCAACGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGC 85742 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCC 44287 || | |||||||| ||| ||||| ||| | | | |||||||| | || || Sbjct 85743 GGAATTCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCA 85802 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | || || |||||||| || | ||||| ||||| || ||||| Sbjct 85803 ACATCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 85852 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | || | |||||||| |||||| || |||||| ||||||||||| || Sbjct 85850 CATACCTCCGCGGAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTC 85909 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | | ||| |||| || |||||||| |||||||||||||||||||| ||||| | Sbjct 85910 GCTCAACGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGG 85969 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | |||||||| ||| ||||| ||| | | | |||||||| | || || Sbjct 85970 CGGAATTCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTC 86029 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | || || |||||||| || | ||||| ||||| || ||||| Sbjct 86030 AACATCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 86080 >seq120 Length=609189 Score = 102 bits (112), Expect = 6e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 || || |||||||||||||||| ||| || | || |||| ||| || ||||| || Sbjct 561974 TCTTTCTGGATGTTGTAATCGGACAGTGTTCGACCATCTTCCAACTGTTTTCCGGCGAAA 561915 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 |||| |||||| ||||| | ||| | || ||||| ||| ||||| ||| | | Sbjct 561914 ATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCCTGGATCTTGGTCTTGACATTA 561855 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | || ||||| | | || || || | ||| || ||||| ||||| | |||||| ||| Sbjct 561854 TCGATAGTGTCAGACGGCTCGACATCGAGCGTGATGGTCTTACCCGTCAAGGTCTTTACG 561795 Query 44327 AAGATTTGCATGAT 44340 ||||||||||| || Sbjct 561794 AAGATTTGCATTAT 561781 >seq2 Length=622807 Score = 98.7 bits (108), Expect = 7e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 || || || |||||||| |||| ||| || | || |||| ||| || ||||| || Sbjct 352884 TCTTTCTGAATGTTGTAGTCGGACAGTGTTCGACCATCTTCCAACTGTTTTCCGGCGAAA 352943 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 ||||||||||| ||||| | ||| | || ||||| ||| ||||| ||| | | Sbjct 352944 ATCAAACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCCTGGATCTTGGTCTTGACATTA 353003 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | || ||||| | | || || || | ||| || ||||| ||||| | |||||| ||| Sbjct 353004 TCGATAGTGTCAGACGGCTCGACATCGAGCGTGATGGTCTTACCCGTCAAGGTCTTTACG 353063 Query 44327 AAGATTTGCATGAT 44340 ||||||||||| || Sbjct 353064 AAGATTTGCATTAT 353077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989105722015