Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq120 143 6e-29 seq232 140 8e-28 seq82 136 1e-26 seq41 136 1e-26 seq226 132 1e-25 seq2 131 4e-25 seq142 129 1e-24 seq67 122 2e-22 >seq120 Length=609189 Score = 143 bits (158), Expect = 6e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || || ||||| ||||| || || || ||| Sbjct 561787 CAAATCTTCGTAAAGACCTTGACGGGTAAGACCATCACGCTCGATGTCGAGCCGTCTGAC 561846 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| || ||||| |||||||| || || Sbjct 561847 ACTATCGATAATGTCAAGACCAAGATCCAGGACAAGGAGGGAATTCCTCCGGATCAACAG 561906 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||||||||||||| | |||||||| | || || ||||||| ||| || Sbjct 561907 CGTCTGATTTTCGCCGGAAAACAGTTGGAAGATGGTCGAACACTGTCCGATTACAACATC 561966 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || |||||||| || ||||| | ||| Sbjct 561967 CAGAAAGAATCGACCTTGCATTTGGTT 561993 >seq232 Length=134552 Score = 140 bits (154), Expect = 8e-28 Identities = 161/214 (75%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| |||||| | || |||||||| || || || || || || || ||| Sbjct 133266 CAGATTTTCGTCAAAACTTTGACCGGAAAAACTATTACGCTTGACGTCGAGCCGTCGGAC 133207 Query 177984 ACCATCGAGAACGTCAA-ACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042 || ||||| || ||||| || ||| || || ||||| ||||| || |||||||||||||| Sbjct 133206 ACGATCGATAATGTCAAGACCAAA-ATCCAAGACAAGGAAGGTATTCCTCCGGACCAGCA 133148 Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102 ||| || || || ||||| || ||| | ||||||||| | ||| | |||||| || | Sbjct 133147 ACGTCTCATTTTTGCCGGTAAGCAGTTGGAAGATGGACGCACTTTAAGCGATTACAATAT 133088 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136 ||||| ||| || ||||||||||| || || Sbjct 133087 TCAAAAGGAAAGCACTTTGCATCTTGTTCTGCGA 133054 >seq82 Length=265081 Score = 136 bits (150), Expect = 1e-26 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || ||||| | || |||||||| || || ||||| || || || ||| Sbjct 263229 CAGATTTTTGTCAAAACCTTGACTGGAAAAACTATTACGCTCGATGTCGAGCCGTCGGAC 263170 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| |||||||| ||||| ||||| || ||||||||||||||| Sbjct 263169 ACGATTGATAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCTCCGGACCAGCAA 263110 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || |||||||| ||| | || |||||| | ||| | |||||| || | Sbjct 263109 CGTCTCATTTTTGCCGGAAAGCAGTTGGAGGATGGACGCACTTTGAGCGATTACAATATT 263050 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136 ||||| ||| || |||||||||| ||| || Sbjct 263049 CAAAAGGAAAGTACTTTGCATCTTGTCTTGCGA 263017 >seq41 Length=265118 Score = 136 bits (150), Expect = 1e-26 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| ||||| | || || ||||| || || ||||| || || || ||| Sbjct 262949 CAGATTTTCGTCAAAACCTTGACCGGCAAAACTATTACGCTCGATGTCGAGCCGTCGGAC 262890 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| |||||||| ||||| ||||| || || |||||||||||| Sbjct 262889 ACGATCGATAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCGCCGGACCAGCAA 262830 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || |||||||| ||| | || |||||| | ||| | |||||| || | Sbjct 262829 CGTCTCATTTTTGCCGGAAAGCAGTTGGAGGATGGACGCACTTTGAGCGATTACAATATT 262770 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136 ||||| ||| || ||||||| |||||| || Sbjct 262769 CAAAAGGAAAGTACTTTGCATCTCGTTTTGCGA 262737 >seq226 Length=603765 Score = 132 bits (146), Expect = 1e-25 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || ||| | || ||||| || ||||||||||| || || ||| ||| Sbjct 85849 CAGATTTTCGTCAAGACTTTGACCGGAAAGACCATCACCCTCGATGTTGAGCCCTCTGAC 85790 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| |||||||| || || || || || Sbjct 85789 ACCATCGACAACGTCAAGACCAAGATCCAGGACAAGGAAGGAATTCCGCCTGATCAACAG 85730 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| |||||||| |||||||| || || | || | ||| || ||| || Sbjct 85729 CGTTTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACGTTGAGCGACTACAACATC 85670 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || || || || || | || ||| | ||| Sbjct 85669 CAGAAGGAGTCTACTCTTCACTTGGTGTTGCGTCTC 85634 Score = 132 bits (146), Expect = 1e-25 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || ||| | || ||||| || ||||||||||| || || ||| ||| Sbjct 86077 CAGATTTTCGTCAAGACTTTGACCGGAAAGACCATCACCCTCGATGTTGAGCCCTCTGAC 86018 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| |||||||| || || || || || Sbjct 86017 ACCATCGACAACGTCAAGACCAAGATCCAGGACAAGGAAGGAATTCCGCCTGATCAACAG 85958 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| |||||||| |||||||| || || | || | ||| || ||| || Sbjct 85957 CGTTTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACGTTGAGCGACTACAACATC 85898 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || || || || || | || ||| | ||| Sbjct 85897 CAGAAGGAGTCTACTCTTCACTTGGTGTTGCGTCTC 85862 >seq2 Length=622807 Score = 131 bits (144), Expect = 4e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || || ||||| ||||| || || || ||| Sbjct 353071 CAAATCTTCGTAAAGACCTTGACGGGTAAGACCATCACGCTCGATGTCGAGCCGTCTGAC 353012 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| || ||||| |||||||| || || Sbjct 353011 ACTATCGATAATGTCAAGACCAAGATCCAGGACAAGGAGGGAATTCCTCCGGATCAACAG 352952 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || ||||||||||||||| | |||||||| | || || |||| || ||| | Sbjct 352951 CGTTTGATTTTCGCCGGAAAACAGTTGGAAGATGGTCGAACACTGTCCGACTACAACATT 352892 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || |||||||| || ||||| | ||| Sbjct 352891 CAGAAAGAATCGACCTTGCATTTGGTT 352865 >seq142 Length=241092 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || || || || || || || ||||| || || || || || Sbjct 170540 CAAATTTTCGTAAAGACACTGACGGGTAAGACCATTACCCTGGACGTTGAGCCTTCGGAT 170481 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| || ||||| || ||||| || ||||| || ||| Sbjct 170480 ACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCCCCGGATCAACAA 170421 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | || |||||||| ||||| | ||||||||| | ||| | ||||| || | Sbjct 170420 CGATTGATTTTCGCCGGTAAACAATTGGAAGATGGACGTACTTTGAGTGATTACAATATT 170361 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||||||||| || |||| | |||||| | ||| || Sbjct 170360 CAAAAAGAATCCACCTTGCACTTGGTTTTGCGTCTCCGA 170322 >seq67 Length=439500 Score = 122 bits (134), Expect = 2e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || || || || || || || ||||| || || || || ||| Sbjct 3066 CAAATTTTCGTAAAGACACTGACGGGTAAGACCATTACCCTGGACGTTGAGCCGTCGGAC 3007 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| || ||||| || ||||| || ||||| || ||| Sbjct 3006 ACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCCCCGGATCAACAA 2947 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | || |||||||| ||||| | ||||||||| | || | ||||| || | Sbjct 2946 CGATTGATTTTCGCCGGTAAACAATTGGAAGATGGACGTACGTTGAGTGATTACAATATT 2887 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || |||||||| || |||| | |||||| Sbjct 2886 CAGAAAGAATCTACCTTGCACTTGGTTTTG 2857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203726650272230