Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq226 111 1e-19 seq2 109 5e-19 seq120 105 6e-18 seq67 91.5 1e-13 seq232 86.0 6e-12 seq142 82.4 7e-11 seq41 82.4 7e-11 >seq226 Length=603765 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| ||||||| || || || ||||||||| ||||| |||||| Sbjct 85626 CCACCGCGGAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 85685 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||||| |||| ||||||||||| ||||| || |||| |||||||| || | ||| Sbjct 85686 AACGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGA 85745 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||||||| ||| || ||| ||| | | | ||||| | ||| || Sbjct 85746 ATTCCTTCCTTGTCCTGGATCTTGGTCTT-GACGTTGTCGATGGTGTCAGAGGGCTCAAC 85804 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || || || || |||| ||||| |||||||||||||| Sbjct 85805 ATCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 85852 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| ||||||| || || || ||||||||| ||||| |||||| Sbjct 85854 CCTCCGCGGAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 85913 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||||| |||| ||||||||||| ||||| || |||| |||||||| || | ||| Sbjct 85914 AACGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGA 85973 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||||||| ||| || ||| ||| | | | ||||| | ||| || Sbjct 85974 ATTCCTTCCTTGTCCTGGATCTTGGTCTT-GACGTTGTCGATGGTGTCAGAGGGCTCAAC 86032 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || || || || |||| ||||| |||||||||||||| Sbjct 86033 ATCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 86080 >seq2 Length=622807 Score = 109 bits (120), Expect = 5e-19 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| ||||| || || ||||||||||| |||||||| || || || | || || Sbjct 352866 ACCAAATGCAAGGTCGATTCTTTCTGAATGTTGTAGTCGGACAGTGTTCGACCATCTTCC 352925 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 | ||| || |||||||| |||| |||||||| |||| |||| | |||||||||| | Sbjct 352926 AACTGTTTTCCGGCGAAAATCAAACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCCTGG 352985 Query 41774 ATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || || ||| || || | |||||| || ||| || || | ||| || || | Sbjct 352986 ATCTTGGTCTTGACATTATCG--ATAGTGTCAGACGGCTCGACATCGAGCGTGATGGTCT 353043 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||||| ||||||||||| || ||||| Sbjct 353044 TACCCGTCAAGGTCTTTACGAAGATTTGCAT 353074 >seq120 Length=609189 Score = 105 bits (116), Expect = 6e-18 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| ||||| || || ||||| ||||| || ||||| || || || | || || Sbjct 561992 ACCAAATGCAAGGTCGATTCTTTCTGGATGTTGTAATCGGACAGTGTTCGACCATCTTCC 561933 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 | ||| || |||||||| ||||| |||||||| |||| |||| | |||||||||| | Sbjct 561932 AACTGTTTTCCGGCGAAAATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCCTGG 561873 Query 41774 ATTTTTTGCTTCA-ACGA-CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || || ||| | | | ||| | ||||| || ||| || || | ||| || || | Sbjct 561872 ATCTTGGTCTTGACATTATCGATA--GTGTCAGACGGCTCGACATCGAGCGTGATGGTCT 561815 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||||| ||||||||||| || ||||| Sbjct 561814 TACCCGTCAAGGTCTTTACGAAGATTTGCAT 561784 >seq67 Length=439500 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| || |||| |||| || || |||||||| || || || Sbjct 2843 CCACCTCGAAGACGCAAAACCAAGTGCAAGGTAGATTCTTTCTGAATATTGTAATCACTC 2902 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || || | || || | || || |||||||| |||| || ||||| |||| |||| Sbjct 2903 AACGTACGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGA 2962 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||||||| ||| || ||| | || | | | ||||| || ||| || Sbjct 2963 ATTCCCTCCTTGTCTTGGATCTTGGTCTTGA-CGTTGTCGATCGTGTCCGACGGCTCAAC 3021 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| || || || ||||||||||| |||||||||||||| |||||| Sbjct 3022 GTCCAGGGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCATG 3070 >seq232 Length=134552 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| | || | || ||||||| ||||| ||||| ||||| || || ||| Sbjct 133043 CCACCGCGCAATCGCAGAACAAGATGCAAAGTGCTTTCCTTTTGAATATTGTAATCGCTT 133102 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||||| | || || | |||||| ||||| || || || || || ||||||| ||| Sbjct 133103 AAAGTGCGTCCATCTTCCAACTGCTTACCGGCAAAAATGAGACGTTGCTGGTCCGGAGGA 133162 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGA-CGACACAGTGTCGCTCGACTCCA 41813 | | |||||||| |||||| ||| | | | ||| ||||| || ||| | Sbjct 133163 ATACCTTCCTTGTCTTGGATTTTGGTCTTGACATTATCGATC--GTGTCCGACGGCTCGA 133220 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || | ||| || ||||| || |||| || || ||||||||||| ||| Sbjct 133221 CGTCAAGCGTAATAGTTTTTCCGGTCAAAGTTTTGACGAAAATCTGAATG 133270 >seq142 Length=241092 Score = 82.4 bits (90), Expect = 7e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| || |||| |||| ||| || || ||||| || || || Sbjct 170317 CCACCTCGGAGACGCAAAACCAAGTGCAAGGTGGATTCTTTTTGAATATTGTAATCACTC 170376 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || || | || || | || || |||||||| |||| || ||||| |||| |||| Sbjct 170377 AAAGTACGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGA 170436 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||||||| ||| || ||| | || | | | || || | ||| || Sbjct 170437 ATTCCCTCCTTGTCTTGGATCTTGGTCTTGA-CGTTGTCGATCGTATCCGAAGGCTCAAC 170495 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| || || || ||||||||||| |||||||||||||| |||||| Sbjct 170496 GTCCAGGGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCATG 170544 >seq41 Length=265118 Score = 82.4 bits (90), Expect = 7e-11 Identities = 161/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| | || || || ||||||| || || ||||| ||||| || || ||| Sbjct 262725 GCCACCGCGCAATCGCAAAACGAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCT 262784 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | ||||| | || || | |||||| ||||| || || || || || ||||||| || Sbjct 262785 CAAAGTGCGTCCATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGCGG 262844 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTG-CTTCA-ACGA-CGACACAGTGTCGCTCGACTC 41811 || | |||||||| ||| | || | ||| | | | ||| ||||| || ||| Sbjct 262845 AATACCTTCCTTGTCT-TGAATCTTGGTCTTGACATTATCGATC--GTGTCCGACGGCTC 262901 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || | ||| || ||||| || |||| || || ||||||||||| ||| Sbjct 262902 GACATCGAGCGTAATAGTTTTGCCGGTCAAGGTTTTGACGAAAATCTGAATG 262953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462302295254000