Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halocafeteria_20seosinensis_20[genbank_20GCA_5F001687465.1_202016- 07-19] 8,058 sequences; 44,620,845 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq2349 107 2e-18 >seq2349 Length=20186 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||||||| | |||||||| ||||| |||||||| || || |||||||| || | | Sbjct 7470 CCTCCTCGCAGACGGAGCACCAAGTGCAATGTGGACTCTTTCTGGATGTTATAATCGGAC 7529 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | | || |||| ||||| || || | || | || |||||| ||| || Sbjct 7530 AAAGTACGCCCATCTTCCAATTGTTTACCAGCGAATATCAATCGCTGCTGATCCGGAGGG 7589 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||| || ||| || |||||||| | | | |||||| || |||| Sbjct 7590 ATGCCTTCCTTATCCTGGATTTTCTGTTTCACGTTCTCAATGGTATCAGAGGCCTCCACA 7649 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGT 21157 |||| || |||||||||||||| || || Sbjct 7650 TCCAGTGTGATGGTCTTGCCGGTCAAAGT 7678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422217731243528