Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halocafeteria_20seosinensis_20[genbank_20GCA_5F001687465.1_202016- 07-19] 8,058 sequences; 44,620,845 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq7 118 1e-21 seq3664 114 1e-20 seq218 114 1e-20 seq1543 113 5e-20 seq826 113 5e-20 seq3538 109 6e-19 seq470 109 6e-19 seq2100 107 2e-18 seq2349 105 8e-18 seq3592 102 9e-17 seq2397 96.9 4e-15 seq80 87.8 2e-12 >seq7 Length=130303 Score = 118 bits (130), Expect = 1e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||| ||||||||||| || ||||| || || ||||| || | ||||| || | Sbjct 35900 ACGCAAGACCAAATGCAAGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCC 35841 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || |||||||| || ||||| ||||| | ||||| || | ||| | || || || Sbjct 35840 GTCTTCCAGCTGCTTCCCTGCGAAAATGAGCCTTTGCTGATCAGGCGGGATGCCTTCTTT 35781 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 |||| |||||| || || | || | | |||||| | ||||||||||| ||||| Sbjct 35780 GTCCTGGATTTTCTGCTTCACGTTCTCGATAGTGTCGGAGGCTTCCACATCGAGGGTGAT 35721 Query 43148 GGTTTTGCCCGTTAGCGTCT 43167 |||||| || || || |||| Sbjct 35720 GGTTTTACCAGTGAGAGTCT 35701 >seq3664 Length=1078 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||| | |||||| ||||| || | || ||||| ||||||||||| |||| Sbjct 850 CCACCTCGGAGACGCAAGACCAAGTGGAGAGTTGATTCCTTCTGAATATTGTAGTCAGAA 791 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || | || || | ||||| || || || || || || ||||| || | || Sbjct 790 AGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACGTTGCTGATCAGGAGGA 731 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | ||||| ||| |||||| ||||||| || | | |||||| || ||||||| Sbjct 730 ATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGTGTCCGACGCTTCCACA 671 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTT 43187 || | |||||||| || || || | ||||| ||||| ||||||||| || Sbjct 670 TCCAAGGTGATGGTCTTCCCGGTCAATGTCTTGACAAAAATTTGCATTGTT 620 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||| | |||||| ||||| || | || ||||| ||||||||||| |||| Sbjct 1078 CCACCTCGGAGACGCAAGACCAAGTGGAGAGTTGATTCCTTCTGAATATTGTAGTCAGAA 1019 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || | || || | ||||| || || || || || || ||||| || | || Sbjct 1018 AGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACGTTGCTGATCAGGAGGA 959 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | ||||| ||| |||||| ||||||| || | | ||||| || ||||||| Sbjct 958 ATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATTGTGTCCGACGCTTCCACA 899 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| || || || | ||||| ||||| |||||||| Sbjct 898 TCCAAGGTGATGGTCTTCCCGGTCAATGTCTTGACAAAAATTTGCAT 852 >seq218 Length=95557 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| |||| | |||||| ||||| || | || ||||| ||||||||||| |||| Sbjct 87613 TCCACCTCGGAGACGCAAGACCAAGTGGAGAGTTGATTCCTTCTGAATATTGTAGTCAGA 87554 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 ||||| || | || |||| ||||| || || || || || || ||||| || | || Sbjct 87553 AAGAGTTCGACCATCTTCTAATTGCTTCCCCGCAAAAATCAGACGTTGCTGATCAGGAGG 87494 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | ||||| ||| |||||| ||||||| || | | |||||| || |||||| Sbjct 87493 AATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGTGTCCGACGCTTCCAC 87434 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| | |||||||| || || || | ||||| ||||| || ||||| Sbjct 87433 ATCCAGGGTGATGGTCTTCCCAGTCAATGTCTTGACAAAAATCTGCAT 87386 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||| | |||||| ||||| || | || ||||| ||||||||||| |||| Sbjct 87384 CCACCTCGGAGACGCAAGACCAAGTGGAGAGTTGATTCCTTCTGAATATTGTAGTCAGAA 87325 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || | || || | ||||| || || || || || || ||||| || | || Sbjct 87324 AGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACGTTGCTGATCAGGAGGA 87265 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | ||||| ||| |||||| ||||||| || | | ||||| || ||||||| Sbjct 87264 ATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATTGTGTCCGACGCTTCCACA 87205 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTT 43187 || | |||||||| || || || | ||||| ||||| ||||||||| || Sbjct 87204 TCCAGGGTGATGGTCTTCCCAGTCAATGTCTTGACAAAAATTTGCATTGTT 87154 >seq1543 Length=600 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||| | |||||| ||||| || | || ||||| ||||||||||| |||| Sbjct 186 CCACCTCGGAGACGCAAGACCAAGTGGAGAGTTGATTCCTTCTGAATATTGTAGTCAGAA 245 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || | || || | ||||| || || || || || || ||||| || | || Sbjct 246 AGAGTTCGACCATCTTCCAATTGCTTYCCCGCAAAAATCAGACGTTGCTGATCAGGAGGA 305 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | ||||| ||| |||||| ||||||| || | | |||||| || ||||||| Sbjct 306 ATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGTGTCCGACGCTTCCACA 365 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| || || || | ||||| |||||||| ||||| Sbjct 366 TCCAGGGTGATGGTCTTCCCAGTCAATGTCTTGACAAAGATCTGCAT 412 >seq826 Length=494 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||| | |||||| ||||| || | || ||||| ||||||||||| |||| Sbjct 230 CCACCTCGGAGACGCAAGACCAAGTGGAGAGTTGATTCCTTCTGAATATTGTAGTCAGAA 171 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || | || || | ||||| || || || || || || ||||| || | || Sbjct 170 AGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACGTTGCTGATCAGGAGGA 111 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | ||||| ||| |||||| ||||||| || | | |||||| || ||||||| Sbjct 110 ATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGTGTCCGACGCTTCCACA 51 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| || || || | ||||| |||||||| ||||| Sbjct 50 TCCAGGGTGATGGTCTTCCCAGTCAATGTCTTGACAAAGATCTGCAT 4 Score = 109 bits (120), Expect = 6e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| |||| | |||||| ||||| || | || ||||| ||||||||||| |||| Sbjct 459 TCCACCTCGGAGACGCAAGACCAAGTGGAGAGTTGATTCCTTCTGAATATTGTAGTCAGA 400 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 ||||| || | || || | ||||| || || || || || || ||||| || | || Sbjct 399 AAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACGTTGCTGATCAGGAGG 340 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | ||||| ||| |||||| ||||||| || | | ||||| || |||||| Sbjct 339 AATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATTGTGTCCGACGCTTCCAC 280 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| | |||||||| || || || | ||||| |||||||| ||||| Sbjct 279 ATCCAAGGTGATGGTCTTCCCGGTCAATGTCTTGACAAAGATCTGCAT 232 >seq3538 Length=489 Score = 109 bits (120), Expect = 6e-19 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||| | |||||| ||||| || | || ||||| ||||||||||| |||| Sbjct 208 CCACCTCGGAGACGCAAGACCAAGTGGAGAGTCGATTCCTTCTGAATATTGTAGTCAGAA 267 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || | || || | ||||| || || || || || || ||||| || | || Sbjct 268 AGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACGTTGCTGATCAGGAGGA 327 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | ||||| ||| |||||| ||||||| || | | |||||| || ||||||| Sbjct 328 ATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCKCAATCGTGTCCGACGCTTCCACA 387 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| || || || | ||||| ||||| || ||||| Sbjct 388 TCCAGGGTGATGGTCTTCCCAGTCAATGTCTTGACAAAAATCTGCAT 434 Score = 102 bits (112), Expect = 9e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| ||||||||||| |||| ||||| || | || || | ||||| || || || Sbjct 16 TCCTTCTGAATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAA 75 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || || ||||| || | || | | ||||| ||| |||||| ||||||| || Sbjct 76 ATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTC 135 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | |||||| || ||||||||| | |||||||| || || || | ||||| ||| Sbjct 136 TCAATCGTGTCCGACGCTTCCACATCCAGGGTGATGGTCTTCCCAGTCAATGTCTTGACA 195 Query 43173 AAGATTTGCAT 43183 || || ||||| Sbjct 196 AAAATCTGCAT 206 >seq470 Length=818 Score = 109 bits (120), Expect = 6e-19 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||| | |||||| ||||| || | || ||||| | ||||||||| |||| Sbjct 103 CCACCTCGGAGACGCAAGACCAAGTGGAGAGTTGATTCCTTCTRAATATTGTAGTCAGAA 162 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || | || || | ||||| || || || || || || ||||| || | || Sbjct 163 AGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACGTTGCTGATCAGGAGGA 222 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | ||||| ||| |||||| ||||||| || | | |||||| || ||||||| Sbjct 223 ATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGTGTCCGACGCTTCCACA 282 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| || || || | ||||| |||||||| ||||| Sbjct 283 TCCAGGGTGATGGTCTTCCCAGTCAAAGTCTTGACAAAGATCTGCAT 329 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||| | |||||| ||||| || | || ||||| ||||||||||| |||| Sbjct 331 CCACCTCGGAGACGCAAGACCAAGTGGAGAGTTGATTCCTTCTGAATATTGTAGTCAGAA 390 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || | || || | ||||| || || || || || || ||||| || | || Sbjct 391 AGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACGTTGCTGATCAGGAGGA 450 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | ||||| ||| |||||| ||||||| || | | ||||| || ||||||| Sbjct 451 ATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATTGTGTCCGACGCTTCCACA 510 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| || || || | ||||| |||||||| ||||| Sbjct 511 TCCAGGGTGATGGTCTTCCCAGTCAAAGTCTTGACAAAGATCTGCAT 557 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||| | |||||| ||||| || | || ||||| ||||||||||| |||| Sbjct 559 CCACCTCGGAGACGCAAGACCAAGTGGAGAGTTGATTCCTTCTGAATATTGTAGTCAGAA 618 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || | || || | ||||| || || || || || || ||||| || | || Sbjct 619 AGAGTTCGACCATCTTCCAATTGCTTCCCCGCAAAAATCAGACGTTGCTGATCAGGAGGA 678 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | ||||| ||| |||||| ||||||| || | | ||||| || ||||||| Sbjct 679 ATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATTGTGTCCGACGCTTCCACA 738 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| || || || | ||||| |||||||| ||||| Sbjct 739 TCCAGGGTGATGGTCTTCCCAGTCAAAGTCTTGACAAAGATCTGCAT 785 >seq2100 Length=597 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||| | |||||| ||||| || | || ||||| ||||||||||| |||| Sbjct 394 CCACCTCGGAGACGCAAGACCAAGTGGAGAGTCGATTCCTTCTGAATATTGTAGTCAGAA 335 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || | || || | ||||| || || || || || || ||||| || | || Sbjct 334 AGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACGTTGCTGATCAGGAGGA 275 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | ||||| ||| |||||| ||||||| || | | |||||| || ||||||| Sbjct 274 ATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGTGTCCGACGCTTCCACA 215 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| || || || | ||||| ||||| || ||||| Sbjct 214 TCCAGGGTGATGGTCTTCCCAGTCAAAGTCTTGACAAAAATCTGCAT 168 Score = 102 bits (112), Expect = 9e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| ||||||||||| |||| ||||| || | || || | ||||| || || || Sbjct 586 TCCTTCTGAATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAA 527 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || || ||||| || | || | | ||||| ||| |||||| ||||||| || Sbjct 526 ATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTC 467 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||| || ||||||||| | |||||||| || || || | ||||| ||| Sbjct 466 TCAATTGTGTCCGACGCTTCCACATCCAGGGTGATGGTCTTCCCAGTCAATGTCTTGACA 407 Query 43173 AAGATTTGCAT 43183 ||||| ||||| Sbjct 406 AAGATCTGCAT 396 >seq2349 Length=20186 Score = 105 bits (116), Expect = 8e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||||| | ||| | |||||| ||||||||| ||| || || || || ||||| | | Sbjct 7470 CCTCCTCGCAGACGGAGCACCAAGTGCAATGTGGACTCTTTCTGGATGTTATAATCGGAC 7529 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||| ||| | || || | || |||||||||||||| | ||||||||| || | || Sbjct 7530 AAAGTACGCCCATCTTCCAATTGTTTACCAGCGAATATCAATCGCTGCTGATCCGGAGGG 7589 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || ||||| ||| |||||| ||||| | || | | || || | |||||| Sbjct 7590 ATGCCTTCCTTATCCTGGATTTTCTGTTTCACGTTCTCAATGGTATCAGAGGCCTCCACA 7649 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 || | |||||||| ||||| || | |||| Sbjct 7650 TCCAGTGTGATGGTCTTGCCGGTCAAAGTCT 7680 >seq3592 Length=385 Score = 102 bits (112), Expect = 9e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| ||||||||||| |||| ||||| || | || || | ||||| || || || Sbjct 370 TCCTTCTGAATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAA 311 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || || ||||| || | || | | ||||| ||| |||||| ||||||| || Sbjct 310 ATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTC 251 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | |||||| || |||||| || | |||||||| || || || | ||||| ||| Sbjct 250 TCAATCGTGTCCGACGCTTCCACGTCCAAGGTGATGGTCTTCCCAGTCAAAGTCTTGACA 191 Query 43173 AAGATTTGCAT 43183 ||||| ||||| Sbjct 190 AAGATCTGCAT 180 >seq2397 Length=4497 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| ||| ||||||| || ||||| || ||||||||||||| |||||| || | Sbjct 1990 CGCAGCACTAAATGCAGAGTAGATTCCTTCTGGATATTGTAATCAGACAGAGTACGTCCA 1931 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || | ||||| ||||| || || | ||||||||| || | || | || || ||| Sbjct 1930 TCCTCCAATTGCTTTCCAGCAAAAATCAATCGCTGCTGATCCGGAGGAATGCCTTCTTTG 1871 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 || |||||| ||||| | || | | || || | ||||||||| | |||||| Sbjct 1870 TCTTGGATTTTCTGTTTCACATTCTCAATGGTATCCGAGGCTTCCACATCCAAGGTGATG 1811 Query 43149 GTTTTGCCCGTTAGCGTCTTTAC 43171 || || || || || ||||| || Sbjct 1810 GTCTTACCAGTAAGGGTCTTGAC 1788 >seq80 Length=198448 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| ||| ||||||| || ||||| || ||||||||||||| ||||| || | Sbjct 77015 CGCAGCACTAAATGCAGAGTAGATTCCTTCTGGATATTGTAATCAGATAGAGTACGTCCA 77074 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || | || || ||||| || || | ||||||||| || | || | || || ||| Sbjct 77075 TCCTCCAATTGTTTTCCAGCAAAAATCAATCGCTGCTGATCAGGAGGAATGCCTTCTTTG 77134 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 || |||||| ||||| | || | | || || | ||||||||| | |||||| Sbjct 77135 TCTTGGATTTTCTGTTTCACATTCTCAATGGTATCCGAGGCTTCCACATCCAAGGTGATG 77194 Query 43149 GTTTTGCCCGTTAGCGTCTTTAC 43171 || || || || || ||||| || Sbjct 77195 GTCTTACCAGTAAGGGTCTTGAC 77217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571760003672240