Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halocafeteria_20seosinensis_20[genbank_20GCA_5F001687465.1_202016- 07-19] 8,058 sequences; 44,620,845 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq5 120 6e-22 >seq5 Length=391144 Score = 120 bits (132), Expect = 6e-22 Identities = 122/159 (77%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 101909 GAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCC 101968 |||| | || |||| |||||||| |||||||||||||| || ||| ||||| || Sbjct 174666 GAACGAGTTATTGCATTTGCTGCTGTTGAAGGAATCTTTTTCTCGGGTTCATTCTGCTCA 174607 Query 101969 ATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATT 102028 || || ||||| || || ||||| || ||||||||||| || ||| ||||| || ||| Sbjct 174606 ATCTTTTGGATAAAAAAGAGGGGACTTATGCCTGGTCTCTGCTTCTCTAATGAATTGATT 174547 Query 102029 TCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATG 102067 || ||||||||||| || ||| | || || |||||| || Sbjct 174546 TCCAGGGACGAAGGACTACATTGTGATTTCGCATGCTTG 174508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989481832255390