Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halocafeteria_20seosinensis_20[genbank_20GCA_5F001687465.1_202016- 07-19] 8,058 sequences; 44,620,845 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq7 96.9 3e-15 >seq7 Length=130303 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852 ||||| ||| | |||||| |||| | ||| | |||||| |||||| | || || || Sbjct 35709 ACTGGTAAAACCATCACCCTCGATGTGGAAGCCTCCGACACTATCGAGAACGTGAAGCAG 35768 Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912 || || ||||||||||| || || || ||||| ||||| ||||||| || || || Sbjct 35769 AAAATCCAGGACAAAGAAGGCATCCCGCCTGATCAGCAAAGGCTCATTTTCGCAGGGAAG 35828 Query 26913 CAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCAT 26972 || || ||||| | | | || |||||| ||||| || || ||||| || | ||| Sbjct 35829 CAGCTGGAAGACGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAATCAACCTTGCAT 35888 Query 26973 CTGGTCCTGAGACTTAGAGGAGG 26995 ||||| || | ||| | || || Sbjct 35889 TTGGTCTTGCGTCTTCGTGGTGG 35911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478614186729760