Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halocafeteria_20seosinensis_20[genbank_20GCA_5F001687465.1_202016- 07-19] 8,058 sequences; 44,620,845 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq3664 120 3e-22 seq218 114 1e-20 seq3538 107 2e-18 seq2100 107 2e-18 seq826 107 2e-18 seq1543 104 2e-17 seq470 104 2e-17 seq2397 100 2e-16 seq80 100 2e-16 seq3592 86.0 5e-12 >seq3664 Length=1078 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 111183 AAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACC 111242 || |||||||||||||||||| || ||||||| || ||||| ||| |||| |||| | Sbjct 620 AACAATGCAAATTTTTGTCAAGACATTGACCGGGAAGACCATCACCTTGGATGTGGAAGC 679 Query 111243 CAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGA 111302 || | ||| | || ||||| ||||| || || ||||| |||| || Sbjct 680 GTCGGACACGATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGA 739 Query 111303 TCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 111362 ||| ||| | || |||| |||||| || |||||||||||| | |||| | | || || Sbjct 740 TCAGCAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTA 799 Query 111363 TAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 ||||| || || ||||| || || || || || |||||||| || ||||| Sbjct 800 CAATATTCAGAAGGAATCAACTCTCCACTTGGTCTTGCGTCTCCGAGGTGG 850 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||||||||||||||| || ||||||| || ||||| ||| |||| |||| | Sbjct 852 ATGCAAATTTTTGTCAAGACATTGACCGGGAAGACCATCACCTTGGATGTGGAAGCGTCG 911 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || ||||| ||||| || || ||||| |||| ||||| Sbjct 912 GACACAATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 971 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || |||| |||||| || |||||||||||| | |||| | | || || ||| Sbjct 972 CAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 1031 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || || ||||| || || || || || |||||||| || ||||| Sbjct 1032 ATTCAGAAGGAATCAACTCTCCACTTGGTCTTGCGTCTCCGAGGTGG 1078 >seq218 Length=95557 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 111183 AAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACC 111242 || |||||||||||||||||| || |||| || || ||||| ||| |||| |||| | Sbjct 87154 AACAATGCAAATTTTTGTCAAGACATTGACTGGGAAGACCATCACCCTGGATGTGGAAGC 87213 Query 111243 CAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGA 111302 || | ||| | || ||||| ||||| || || ||||| |||| || Sbjct 87214 GTCGGACACAATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGA 87273 Query 111303 TCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 111362 ||| ||| | || |||| |||||| || |||||||||||| | |||| | | || || Sbjct 87274 TCAGCAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTA 87333 Query 111363 TAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 ||||| || || ||||| || || || || || |||||||| || ||||| Sbjct 87334 CAATATTCAGAAGGAATCAACTCTCCACTTGGTCTTGCGTCTCCGAGGTGG 87384 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| ||||||||||| || |||| || || ||||| ||| |||| |||| | Sbjct 87386 ATGCAGATTTTTGTCAAGACATTGACTGGGAAGACCATCACCCTGGATGTGGAAGCGTCG 87445 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || ||||| ||||| || || ||||| |||| ||||| Sbjct 87446 GACACGATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 87505 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || |||| |||||| || ||||| |||||| | |||| | | || || ||| Sbjct 87506 CAACGTCTGATTTTTGCGGGGAAGCAATTAGAAGATGGTCGAACTCTTTCTGACTACAAT 87565 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || || ||||| || || || || || |||||||| || ||||| Sbjct 87566 ATTCAGAAGGAATCAACTCTCCACTTGGTCTTGCGTCTCCGAGGTGG 87612 >seq3538 Length=489 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| ||||||||||| || |||| || || ||||| ||| |||| |||| | Sbjct 434 ATGCAGATTTTTGTCAAGACATTGACTGGGAAGACCATCACCCTGGATGTGGAAGCGTCG 375 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || ||||| ||||| || || ||||| |||| ||||| Sbjct 374 GACACGATTGMGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 315 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || |||| |||||| || |||||||||||| | |||| | | || || ||| Sbjct 314 CAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 255 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || || ||||| || || || || || |||||||| || ||||| Sbjct 254 ATTCAGAAGGAATCGACTCTCCACTTGGTCTTGCGTCTCCGAGGTGG 208 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| ||||||||||| || |||| || || ||||| ||| |||| |||| | Sbjct 206 ATGCAGATTTTTGTCAAGACATTGACTGGGAAGACCATCACCCTGGATGTGGAAGCGTCG 147 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || ||||| ||||| || || ||||| |||| ||||| Sbjct 146 GACACGATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 87 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || |||| |||||| || |||||||||||| | |||| | | || || ||| Sbjct 86 CAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 27 Query 111367 ATACAAAAAGAATCTACACTACATTT 111392 || || || ||||| || || || || Sbjct 26 ATTCAGAAGGAATCGACTCTCCACTT 1 >seq2100 Length=597 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| ||||||||||| || |||| || || ||||| ||| |||| |||| | Sbjct 168 ATGCAGATTTTTGTCAAGACTTTGACTGGGAAGACCATCACCCTGGATGTGGAAGCGTCG 227 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || ||||| ||||| || || ||||| |||| ||||| Sbjct 228 GACACGATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 287 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || |||| |||||| || |||||||||||| | |||| | | || || ||| Sbjct 288 CAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 347 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || || ||||| || || || || || |||||||| || ||||| Sbjct 348 ATTCAGAAGGAATCGACTCTCCACTTGGTCTTGCGTCTCCGAGGTGG 394 Score = 86.0 bits (94), Expect = 5e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 111262 GTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTAT 111321 || ||||| ||||| || || ||||| |||| ||||| ||| | || |||| | Sbjct 15 GTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAACGTCTGATTTTT 74 Query 111322 GCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCT 111381 ||||| || |||||||||||| | |||| | | || || ||||| || || ||||| Sbjct 75 GCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAATATTCAGAAGGAATCA 134 Query 111382 ACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || || || || |||||||| || ||||| Sbjct 135 ACTCTCCACTTGGTCTTGCGTCTCCGAGGTGG 166 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || |||||||| || |||| || || ||||| ||| |||| |||| | Sbjct 396 ATGCAGATCTTTGTCAAGACATTGACTGGGAAGACCATCACCCTGGATGTGGAAGCGTCG 455 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || ||||| ||||| || || ||||| |||| ||||| Sbjct 456 GACACAATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 515 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || |||| |||||| || |||||||||||| | |||| | | || || ||| Sbjct 516 CAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 575 Query 111367 ATACAAAAAGAATCTACACT 111386 || || || ||||| || || Sbjct 576 ATTCAGAAGGAATCGACTCT 595 >seq826 Length=494 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || |||||||| || ||||||| || ||||| ||| |||| |||| | Sbjct 232 ATGCAGATCTTTGTCAAGACATTGACCGGGAAGACCATCACCTTGGATGTGGAAGCGTCG 291 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || ||||| ||||| || || ||||| |||| ||||| Sbjct 292 GACACAATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 351 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || |||| |||||| || |||||||||||| | |||| | | || || ||| Sbjct 352 CAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 411 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || || ||||| || || || || || |||||||| || ||||| Sbjct 412 ATTCAGAAGGAATCAACTCTCCACTTGGTCTTGCGTCTCCGAGGTGG 458 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || |||||||| || |||| || || ||||| ||| |||| |||| | Sbjct 4 ATGCAGATCTTTGTCAAGACATTGACTGGGAAGACCATCACCCTGGATGTGGAAGCGTCG 63 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || ||||| ||||| || || ||||| |||| ||||| Sbjct 64 GACACGATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 123 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || |||| |||||| || |||||||||||| | |||| | | || || ||| Sbjct 124 CAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 183 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || || ||||| || || || || || |||||||| || ||||| Sbjct 184 ATTCAGAAGGAATCAACTCTCCACTTGGTCTTGCGTCTCCGAGGTGG 230 >seq1543 Length=600 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || |||||||| || |||| || || ||||| ||| |||| |||| | Sbjct 412 ATGCAGATCTTTGTCAAGACATTGACTGGGAAGACCATCACCCTGGATGTGGAAGCGTCG 353 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || ||||| ||||| || || ||||| |||| ||||| Sbjct 352 GACACGATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 293 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || |||| |||||| || |||||||||||| | |||| | | || || ||| Sbjct 292 CAACGTCTGATTTTTGCGGGRAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 233 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || || ||||| || || || || || |||||||| || ||||| Sbjct 232 ATTCAGAAGGAATCAACTCTCCACTTGGTCTTGCGTCTCCGAGGTGG 186 Score = 86.0 bits (94), Expect = 5e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 111262 GTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTAT 111321 || ||||| ||||| || || ||||| |||| ||||| ||| | || |||| | Sbjct 565 GTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAACGTCTGATTTTT 506 Query 111322 GCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCT 111381 ||||| || |||||||||||| | |||| | | || || ||||| || || ||||| Sbjct 505 GCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAATATTCAGAAGGAATCA 446 Query 111382 ACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || || || || |||||||| || ||||| Sbjct 445 ACTCTCCACTTGGTCTTGCGTCTCCGAGGTGG 414 >seq470 Length=818 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || |||||||| || |||| || || ||||| ||| |||| |||| | Sbjct 557 ATGCAGATCTTTGTCAAGACTTTGACTGGGAAGACCATCACCCTGGATGTGGAAGCGTCG 498 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || ||||| ||||| || || ||||| |||| ||||| Sbjct 497 GACACAATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 438 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || |||| |||||| || |||||||||||| | |||| | | || || ||| Sbjct 437 CAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 378 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || || ||||| || || || || || |||||||| || ||||| Sbjct 377 ATTCAGAAGGAATCAACTCTCCACTTGGTCTTGCGTCTCCGAGGTGG 331 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || |||||||| || |||| || || ||||| ||| |||| |||| | Sbjct 785 ATGCAGATCTTTGTCAAGACTTTGACTGGGAAGACCATCACCCTGGATGTGGAAGCGTCG 726 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || ||||| ||||| || || ||||| |||| ||||| Sbjct 725 GACACAATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 666 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || |||| |||||| || |||||||||||| | |||| | | || || ||| Sbjct 665 CAACGTCTGATTTTTGCGGGGAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 606 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || || ||||| || || || || || |||||||| || ||||| Sbjct 605 ATTCAGAAGGAATCAACTCTCCACTTGGTCTTGCGTCTCCGAGGTGG 559 Score = 100 bits (110), Expect = 2e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || |||||||| || |||| || || ||||| ||| |||| |||| | Sbjct 329 ATGCAGATCTTTGTCAAGACTTTGACTGGGAAGACCATCACCCTGGATGTGGAAGCGTCG 270 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || ||||| ||||| || || ||||| |||| ||||| Sbjct 269 GACACGATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 210 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || |||| |||||| || |||||||||||| | |||| | | || || ||| Sbjct 209 CAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 150 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || | || ||||| || || || || || |||||||| || ||||| Sbjct 149 ATTYAGAAGGAATCAACTCTCCACTTGGTCTTGCGTCTCCGAGGTGG 103 >seq2397 Length=4497 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 111199 GTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGTTGGC 111258 ||||| || | || || || ||||| ||| |||| |||| || ||| | ||| Sbjct 1788 GTCAAGACCCTTACTGGTAAGACCATCACCTTGGATGTGGAAGCCTCGGATACCATTGAG 1847 Query 111259 CAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATT 111318 | || ||||| ||||| |||||||||||| |||| ||||| || | | ||| Sbjct 1848 AATGTGAAACAGAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAGCAGCGATTGATT 1907 Query 111319 TATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAAAGAA 111378 | ||| || || |||||||| ||| ||| || | ||||| ||||| || || ||| Sbjct 1908 TTTGCTGGAAAGCAATTGGAGGATGGACGTACTCTGTCTGATTACAATATCCAGAAGGAA 1967 Query 111379 TCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 ||||| || ||||||||| |||| || || ||||| Sbjct 1968 TCTACTCTGCATTTAGTGCTGCGCCTCCGTGGTGG 2002 >seq80 Length=198448 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 111199 GTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGTTGGC 111258 ||||| || | || || || ||||| ||| |||| |||| || ||| | ||| Sbjct 77217 GTCAAGACCCTTACTGGTAAGACCATCACCTTGGATGTGGAAGCCTCGGATACCATTGAG 77158 Query 111259 CAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATT 111318 | || ||||| ||||| |||||||||||| |||| ||||| || | | ||| Sbjct 77157 AATGTGAAACAGAAAATCCAAGACAAAGAAGGCATTCCTCCTGATCAGCAGCGATTGATT 77098 Query 111319 TATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAAAGAA 111378 | ||| || ||||||||||| ||| ||| | | ||||| ||||| || || ||| Sbjct 77097 TTTGCTGGAAAACAATTGGAGGATGGACGTACTCTATCTGATTACAATATCCAGAAGGAA 77038 Query 111379 TCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 ||||| || ||||||||| |||| || || ||||| Sbjct 77037 TCTACTCTGCATTTAGTGCTGCGCCTCCGTGGTGG 77003 >seq3592 Length=385 Score = 86.0 bits (94), Expect = 5e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 111262 GTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTAT 111321 || ||||| ||||| || || ||||| |||| ||||| ||| | || |||| | Sbjct 27 GTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAACGTCTGATTTTT 86 Query 111322 GCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCT 111381 ||||| || |||||||||||| | |||| | | || || ||||| || || ||||| Sbjct 87 GCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAATATTCAGAAGGAATCA 146 Query 111382 ACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || || || || |||||||| || ||||| Sbjct 147 ACTCTCCACTTGGTCTTGCGTCTCCGAGGTGG 178 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || |||||||| || |||| || || ||||| ||| |||| |||| | Sbjct 180 ATGCAGATCTTTGTCAAGACTTTGACTGGGAAGACCATCACCTTGGACGTGGAAGCGTCG 239 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || ||||| ||||| || || ||||| |||| ||||| Sbjct 240 GACACGATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 299 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || |||| |||||| || |||||||||||| | |||| | | || || ||| Sbjct 300 CAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 359 Query 111367 ATACAAAAAGAATCTACACTACATTT 111392 || || || ||||| || || || || Sbjct 360 ATTCAGAAGGAATCAACTCTCCACTT 385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422998454563600