Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halocafeteria_20seosinensis_20[genbank_20GCA_5F001687465.1_202016- 07-19] 8,058 sequences; 44,620,845 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq470 116 2e-21 seq2100 114 8e-21 seq826 114 8e-21 seq1543 111 1e-19 seq3538 109 4e-19 seq3592 107 1e-18 seq3664 104 2e-17 seq218 100 2e-16 >seq470 Length=818 Score = 116 bits (128), Expect = 2e-21 Identities = 156/216 (72%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || ||| |||| ||| || ||||| ||||| |||| |||| Sbjct 117 CAAGACCAAGTGGAGAGTTGATTCCTTCTRAATATTGTAGTCAGAAAGAGTTCGACCATC 176 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| || ||||| ||||| || || |||||||| || | || | || ||||| || Sbjct 177 TTCCAATTGCTTTCCCGCAAAAATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTATC 236 Query 34889 GCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || ||||||||||| || || |||| || || || ||||| | ||| ||| Sbjct 237 CTGGATTTTCTGTTTGAC--ATTCTCAATCGTGTCCGACGCTTCCACATCCAGGGTGATG 294 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || | |||||| ||||||||||||||| Sbjct 295 GTCTTCCCAGTCAAAGTCTTGACAAAGATCTGCATA 330 Score = 114 bits (126), Expect = 8e-21 Identities = 156/216 (72%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || ||| |||||||| || ||||| ||||| |||| |||| Sbjct 345 CAAGACCAAGTGGAGAGTTGATTCCTTCTGAATATTGTAGTCAGAAAGAGTTCGACCATC 404 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| || ||||| ||||| || || |||||||| || | || | || ||||| || Sbjct 405 TTCCAATTGCTTTCCCGCAAAAATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTATC 464 Query 34889 GCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || ||||||||||| || || || | || || || ||||| | ||| ||| Sbjct 465 CTGGATTTTCTGTTTGAC--ATTCTCAATTGTGTCCGACGCTTCCACATCCAGGGTGATG 522 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || | |||||| ||||||||||||||| Sbjct 523 GTCTTCCCAGTCAAAGTCTTGACAAAGATCTGCATA 558 Score = 109 bits (120), Expect = 4e-19 Identities = 155/216 (72%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || ||| |||||||| || ||||| ||||| |||| |||| Sbjct 573 CAAGACCAAGTGGAGAGTTGATTCCTTCTGAATATTGTAGTCAGAAAGAGTTCGACCATC 632 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| || || || ||||| || || |||||||| || | || | || ||||| || Sbjct 633 TTCCAATTGCTTCCCCGCAAAAATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTATC 692 Query 34889 GCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || ||||||||||| || || || | || || || ||||| | ||| ||| Sbjct 693 CTGGATTTTCTGTTTGAC--ATTCTCAATTGTGTCCGACGCTTCCACATCCAGGGTGATG 750 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || | |||||| ||||||||||||||| Sbjct 751 GTCTTCCCAGTCAAAGTCTTGACAAAGATCTGCATA 786 >seq2100 Length=597 Score = 114 bits (126), Expect = 8e-21 Identities = 156/216 (72%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || ||| |||||||| || ||||| ||||| |||| |||| Sbjct 380 CAAGACCAAGTGGAGAGTCGATTCCTTCTGAATATTGTAGTCAGAAAGAGTTCGACCATC 321 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| || ||||| ||||| || || |||||||| || | || | || ||||| || Sbjct 320 TTCCAATTGCTTTCCCGCAAAAATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTATC 261 Query 34889 GCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || ||||||||||| || || |||| || || || ||||| | ||| ||| Sbjct 260 CTGGATTTTCTGTTTGAC--ATTCTCAATCGTGTCCGACGCTTCCACATCCAGGGTGATG 203 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || | |||||| ||||| ||||||||| Sbjct 202 GTCTTCCCAGTCAAAGTCTTGACAAAAATCTGCATA 167 Score = 104 bits (114), Expect = 2e-17 Identities = 141/195 (72%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| |||||||| || ||||| ||||| |||| |||| |||| || ||||| ||||| Sbjct 587 TTCCTTCTGAATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAA 528 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || |||||||| || | || | || ||||| || || ||||||||||| | Sbjct 527 AATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGAC--A 470 Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | || || | || || || ||||| | ||| ||||| || || || | ||||| Sbjct 469 TTCTCAATTGTGTCCGACGCTTCCACATCCAGGGTGATGGTCTTCCCAGTCAATGTCTTG 410 Query 34968 ACAAAGATCTGCATA 34982 ||||||||||||||| Sbjct 409 ACAAAGATCTGCATA 395 Score = 82.4 bits (90), Expect = 5e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || ||| |||||||| || ||||| ||||| |||| |||| Sbjct 152 CAAGACCAAGTGGAGAGTTGATTCCTTCTGAATATTGTAGTCAGAAAGAGTTCGACCATC 93 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| || ||||| ||||| || || |||||||| || | || | || ||||| || Sbjct 92 TTCCAATTGCTTTCCCGCAAAAATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTATC 33 Query 34889 GCTAATCTTCTGTTTGAC 34906 || ||||||||||| Sbjct 32 CTGGATTTTCTGTTTGAC 15 >seq826 Length=494 Score = 114 bits (126), Expect = 8e-21 Identities = 156/216 (72%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || ||| |||||||| || ||||| ||||| |||| |||| Sbjct 216 CAAGACCAAGTGGAGAGTTGATTCCTTCTGAATATTGTAGTCAGAAAGAGTTCGACCATC 157 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| || ||||| ||||| || || |||||||| || | || | || ||||| || Sbjct 156 TTCCAATTGCTTTCCCGCAAAAATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTATC 97 Query 34889 GCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || ||||||||||| || || |||| || || || ||||| | ||| ||| Sbjct 96 CTGGATTTTCTGTTTGAC--ATTCTCAATCGTGTCCGACGCTTCCACATCCAGGGTGATG 39 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || | ||||| ||||||||||||||| Sbjct 38 GTCTTCCCAGTCAATGTCTTGACAAAGATCTGCATA 3 Score = 109 bits (120), Expect = 4e-19 Identities = 155/216 (72%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || ||| |||||||| || ||||| ||||| |||| |||| Sbjct 444 CAAGACCAAGTGGAGAGTTGATTCCTTCTGAATATTGTAGTCAGAAAGAGTTCGACCATC 385 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| || ||||| ||||| || || |||||||| || | || | || ||||| || Sbjct 384 TTCCAATTGCTTTCCCGCAAAAATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTATC 325 Query 34889 GCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || ||||||||||| || || || | || || || ||||| | ||| ||| Sbjct 324 CTGGATTTTCTGTTTGAC--ATTCTCAATTGTGTCCGACGCTTCCACATCCAAGGTGATG 267 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || | ||||| ||||||||||||||| Sbjct 266 GTCTTCCCGGTCAATGTCTTGACAAAGATCTGCATA 231 >seq1543 Length=600 Score = 111 bits (122), Expect = 1e-19 Identities = 155/216 (72%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || ||| |||||||| || ||||| ||||| |||| |||| Sbjct 200 CAAGACCAAGTGGAGAGTTGATTCCTTCTGAATATTGTAGTCAGAAAGAGTTCGACCATC 259 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| || || || ||||| || || |||||||| || | || | || ||||| || Sbjct 260 TTCCAATTGCTTYCCCGCAAAAATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTATC 319 Query 34889 GCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || ||||||||||| || || |||| || || || ||||| | ||| ||| Sbjct 320 CTGGATTTTCTGTTTGAC--ATTCTCAATCGTGTCCGACGCTTCCACATCCAGGGTGATG 377 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || | ||||| ||||||||||||||| Sbjct 378 GTCTTCCCAGTCAATGTCTTGACAAAGATCTGCATA 413 Score = 98.7 bits (108), Expect = 6e-16 Identities = 135/187 (72%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 34798 GAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTC 34857 |||| || ||||| ||||| |||| |||| |||| || ||||| ||||| || || | Sbjct 1 GAATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGAC 60 Query 34858 GTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--AT 34915 ||||||| || | || | || ||||| || || ||||||||||| || || || Sbjct 61 GTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGAC--ATTCTCAAT 118 Query 34916 CGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGAT 34975 || || || || ||||| | ||| ||||| || || || | |||||| ||||| || Sbjct 119 CGTGTCCGACGCTTCCACATCCAGGGTGATGGTCTTCCCAGTCAAAGTCTTGACAAAAAT 178 Query 34976 CTGCATA 34982 ||||||| Sbjct 179 CTGCATA 185 Score = 82.4 bits (90), Expect = 5e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || ||| |||||||| || ||||| ||||| |||| |||| Sbjct 428 CAAGACCAAGTGGAGAGTTGATTCCTTCTGAATATTGTAGTCAGAAAGAGTTCGACCATC 487 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| || ||||| ||||| || || |||||||| || | || | || ||||| || Sbjct 488 TTCCAATTGCTTTCCCGCAAAAATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTATC 547 Query 34889 GCTAATCTTCTGTTTGAC 34906 || ||||||||||| Sbjct 548 CTGGATTTTCTGTTTGAC 565 >seq3538 Length=489 Score = 109 bits (120), Expect = 4e-19 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || ||| |||||||| || ||||| ||||| |||| |||| Sbjct 222 CAAGACCAAGTGGAGAGTCGATTCCTTCTGAATATTGTAGTCAGAAAGAGTTCGACCATC 281 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| || ||||| ||||| || || |||||||| || | || | || ||||| || Sbjct 282 TTCCAATTGCTTTCCCGCAAAAATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTATC 341 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 || ||||||||||| | |||| || || || ||||| | ||| ||||| Sbjct 342 CTGGATTTTCTGTTTGACATTCKCAATCGTGTCCGACGCTTCCACATCCAGGGTGATGGT 401 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | ||||| ||||| ||||||||| Sbjct 402 CTTCCCAGTCAATGTCTTGACAAAAATCTGCATA 435 Score = 104 bits (114), Expect = 2e-17 Identities = 141/195 (72%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| |||||||| || ||||| ||||| |||| |||| |||| || ||||| ||||| Sbjct 15 TTCCTTCTGAATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAA 74 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || |||||||| || | || | || ||||| || || ||||||||||| | Sbjct 75 AATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGAC--A 132 Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | || |||| || || || ||||| | ||| ||||| || || || | ||||| Sbjct 133 TTCTCAATCGTGTCCGACGCTTCCACATCCAGGGTGATGGTCTTCCCAGTCAATGTCTTG 192 Query 34968 ACAAAGATCTGCATA 34982 ||||| ||||||||| Sbjct 193 ACAAAAATCTGCATA 207 >seq3592 Length=385 Score = 107 bits (118), Expect = 1e-18 Identities = 142/195 (73%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| |||||||| || ||||| ||||| |||| |||| |||| || ||||| ||||| Sbjct 371 TTCCTTCTGAATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAA 312 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || |||||||| || | || | || ||||| || || ||||||||||| | Sbjct 311 AATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGAC--A 254 Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | || |||| || || || || || | ||| ||||| || || || | |||||| Sbjct 253 TTCTCAATCGTGTCCGACGCTTCCACGTCCAAGGTGATGGTCTTCCCAGTCAAAGTCTTG 194 Query 34968 ACAAAGATCTGCATA 34982 ||||||||||||||| Sbjct 193 ACAAAGATCTGCATA 179 Score = 82.4 bits (90), Expect = 5e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || ||| |||||||| || ||||| ||||| |||| |||| Sbjct 164 CAAGACCAAGTGGAGAGTTGATTCCTTCTGAATATTGTAGTCAGAAAGAGTTCGACCATC 105 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| || ||||| ||||| || || |||||||| || | || | || ||||| || Sbjct 104 TTCCAATTGCTTTCCCGCAAAAATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTATC 45 Query 34889 GCTAATCTTCTGTTTGAC 34906 || ||||||||||| Sbjct 44 CTGGATTTTCTGTTTGAC 27 >seq3664 Length=1078 Score = 104 bits (114), Expect = 2e-17 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || ||| |||||||| || ||||| ||||| |||| |||| Sbjct 836 CAAGACCAAGTGGAGAGTTGATTCCTTCTGAATATTGTAGTCAGAAAGAGTTCGACCATC 777 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| || ||||| ||||| || || |||||||| || | || | || ||||| || Sbjct 776 TTCCAATTGCTTTCCCGCAAAAATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTATC 717 Query 34889 GCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || ||||||||||| || || |||| || || || ||||| | ||| ||| Sbjct 716 CTGGATTTTCTGTTTGAC--ATTCTCAATCGTGTCCGACGCTTCCACATCCAAGGTGATG 659 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || || | ||||| ||||| || ||||| Sbjct 658 GTCTTCCCGGTCAATGTCTTGACAAAAATTTGCAT 624 Score = 100 bits (110), Expect = 2e-16 Identities = 153/216 (71%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || ||| |||||||| || ||||| ||||| |||| |||| Sbjct 1064 CAAGACCAAGTGGAGAGTTGATTCCTTCTGAATATTGTAGTCAGAAAGAGTTCGACCATC 1005 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| || ||||| ||||| || || |||||||| || | || | || ||||| || Sbjct 1004 TTCCAATTGCTTTCCCGCAAAAATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTATC 945 Query 34889 GCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || ||||||||||| || || || | || || || ||||| | ||| ||| Sbjct 944 CTGGATTTTCTGTTTGAC--ATTCTCAATTGTGTCCGACGCTTCCACATCCAAGGTGATG 887 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || | ||||| ||||| || |||||| Sbjct 886 GTCTTCCCGGTCAATGTCTTGACAAAAATTTGCATA 851 >seq218 Length=95557 Score = 100 bits (110), Expect = 2e-16 Identities = 153/216 (71%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || ||| |||||||| || ||||| ||||| |||| |||| Sbjct 87598 CAAGACCAAGTGGAGAGTTGATTCCTTCTGAATATTGTAGTCAGAAAGAGTTCGACCATC 87539 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || | || || || ||||| || || |||||||| || | || | || ||||| || Sbjct 87538 TTCTAATTGCTTCCCCGCAAAAATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTATC 87479 Query 34889 GCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || ||||||||||| || || |||| || || || ||||| | ||| ||| Sbjct 87478 CTGGATTTTCTGTTTGAC--ATTCTCAATCGTGTCCGACGCTTCCACATCCAGGGTGATG 87421 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || | ||||| ||||| ||||||||| Sbjct 87420 GTCTTCCCAGTCAATGTCTTGACAAAAATCTGCATA 87385 Score = 98.7 bits (108), Expect = 6e-16 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || ||| |||||||| || ||||| ||||| |||| |||| Sbjct 87370 CAAGACCAAGTGGAGAGTTGATTCCTTCTGAATATTGTAGTCAGAAAGAGTTCGACCATC 87311 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| || ||||| ||||| || || |||||||| || | || | || ||||| || Sbjct 87310 TTCCAATTGCTTTCCCGCAAAAATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTATC 87251 Query 34889 GCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || ||||||||||| || || || | || || || ||||| | ||| ||| Sbjct 87250 CTGGATTTTCTGTTTGAC--ATTCTCAATTGTGTCCGACGCTTCCACATCCAGGGTGATG 87193 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || || | ||||| ||||| || ||||| Sbjct 87192 GTCTTCCCAGTCAATGTCTTGACAAAAATTTGCAT 87158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324601718748624