Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halocafeteria_20seosinensis_20[genbank_20GCA_5F001687465.1_202016- 07-19] 8,058 sequences; 44,620,845 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1110 149 5e-30 seq80 129 5e-24 seq218 122 7e-22 seq3664 120 2e-21 seq2100 120 2e-21 seq1543 120 2e-21 seq470 120 2e-21 seq826 118 9e-21 seq3592 114 1e-19 seq3538 114 1e-19 seq2397 114 1e-19 seq263 89.7 4e-12 >seq1110 Length=22515 Score = 149 bits (164), Expect = 5e-30 Identities = 464/713 (65%), Gaps = 19/713 (3%) Strand=Plus/Minus Query 551890 CCAAAGCTC--TTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATC 551947 |||| |||| |||||||| | ||||| || ||||| | || ||||| | ||||| || Sbjct 9164 CCAACGCTCCATTCGTCGTTTGAGAACCGCATGCGAGCGGGCAAAACGCACGCTTTCCTC 9105 Query 551948 TGGTACTCAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCC 552007 ||||||| | || ||| | || ||| | ||||| ||| | ||||| | ||| | Sbjct 9104 AAGTACTCAGGCTTTCATCGAAATCGACTCACTCTTTGAAGGAGTAGATTACAGTACAAC 9045 Query 552008 TATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAA-ACAATTGAAC 552066 || | | || || ||||| || || || || ||| | || ||| || | | Sbjct 9044 ACTTACTCGTGCTCGTTTCGAAGAAATGTGCATGGA-CTATTTCAAGAAGACAGTTCAGC 8986 Query 552067 CAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGC 552126 | || || ||||| | | ||| | ||||| | ||| | ||||||||||| || | Sbjct 8985 CTGTGGATAAAGTTCTTCGCGATGCCAAGATGGGCAAAGGAGACGTACATGAAATCGTTC 8926 Query 552127 TTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCT---TATTTCA 552183 ||||||| || ||||| | || || || || | | ||| | |||| ||||||| Sbjct 8925 TTGTTGGAGGTTCTACCCGTATCCCCAAGATCCAGAATATGCT---TTCTGAGTATTTCA 8869 Query 552184 ATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAA 552243 |||| || || | | || | || || ||||| || || ||||| || || || Sbjct 8868 ATGGAAAGGAAGCTTGTAAGAGCATCAACCCTGATGAAGCCGTAGCCTACGGAGCTACAG 8809 Query 552244 TTCAAGCAGCTATTCTTTCTGGACAAACTGA------TGAAAAACTACAAAATATTGTAC 552297 | ||||||||||| ||| |||| |||||| | ||| | | || | | | Sbjct 8808 TACAAGCAGCTATCCTTGCTGG---AACTGACAAGGGAGGGAAATTGGATGATTTGTTGC 8752 Query 552298 TTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATC 552357 | | ||||| ||||| | || | ||| | ||||||| ||| ||| | ||||| | | Sbjct 8751 TATTGGATGTAGCTCCTTTGTCCATGGGTCTCGAAACAGCTGGTGGTGTGATGACAACAC 8692 Query 552358 TTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAG 552417 | || |||| || || ||||| || || || | | ||| || || || || | Sbjct 8691 TCATTCCCCGAAACACGACCATTCCCTGCAAGAAGACACAGACATTCTCCACATACTCTG 8632 Query 552418 ATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATA 552477 | || ||| ||| ||| |||||| |||| || |||||| | | || || || | Sbjct 8631 ACAACCAACCTGGTGTACTGATTCAAGTTTTCGAGGGAGAACGCTCTATGACCAAGGACA 8572 Query 552478 ATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGC 552537 | || | || || | || || |||| |||||||| || | || || | || | Sbjct 8571 ACAACCTTCTAGGGAAGTTCCATCTAGACGGTATTCCCCCCATGGCCCGAGGTATTCCCC 8512 Query 552538 AAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCT 552590 | ||||| ||||| | ||||||||||| ||||| ||| | || || | |||| Sbjct 8511 AGATTGAGGTTACCTATGATATCGATGCGAATGGTATTCTTAACGTCAGTGCT 8459 >seq80 Length=198448 Score = 129 bits (142), Expect = 5e-24 Identities = 156/209 (75%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||| || || || | ||| || ||| ||| || ||||||||||||| |||||| | Sbjct 77011 GAGGCGCAGCACTAAATGCAGAGTAGATTCCTTCTGGATATTGTAATCAGATAGAGTACG 77070 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 | ||| || | ||||||||| |||||||| | || ||||||||||||||||| ||||| Sbjct 77071 TCCATCCTCCAATTGTTTTCCAGCAAAAATCAATCGCTGCTGATCAGGAGGAATGCCTTC 77130 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT--ACATTCGAGA 563433 ||| ||||| ||||| ||||| || |||||| ||||| | | | | |||| | || Sbjct 77131 TTTGTCTTGGATTTTCTGTTTCACATTCTCAATGGTATCCGAG-GCTTCCACATCCAAG- 77188 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAAC 563462 || | || ||||||||||| || || || Sbjct 77189 GTGATGGTCTTACCAGTAAGGGTCTTGAC 77217 >seq218 Length=95557 Score = 122 bits (134), Expect = 7e-22 Identities = 139/184 (76%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| ||||||| |||||| | ||| ||||| |||||||| || | Sbjct 87340 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 87281 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||||||||||||||||||||| ||||| || ||||| ||||| || ||||||||| Sbjct 87280 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATTGT 87221 Query 563412 ATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 || | | | || || || || | || || ||||| | || || || ||||||| Sbjct 87220 GTCCG-ACGCTTCCACATCCAGGGTGATGGTCTTCCCAGTCAATGTCTTGACAAAAATTT 87162 Query 563471 GCAT 563474 |||| Sbjct 87161 GCAT 87158 Score = 111 bits (122), Expect = 1e-18 Identities = 137/185 (74%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| ||||||| |||||| | ||| || || |||||||| || | Sbjct 87568 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCTAATTGCTTCCCCGCAAAAATCAGACG 87509 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||||||||||||||||||||| ||||| || ||||| ||||| || |||||| || Sbjct 87508 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGT 87449 Query 563412 ATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 || | | | || || || || | || || ||||| | || || || ||||| | Sbjct 87448 GTCCG-ACGCTTCCACATCCAGGGTGATGGTCTTCCCAGTCAATGTCTTGACAAAAATCT 87390 Query 563471 GCATA 563475 ||||| Sbjct 87389 GCATA 87385 >seq3664 Length=1078 Score = 120 bits (132), Expect = 2e-21 Identities = 139/185 (75%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| ||||||| |||||| | ||| ||||| |||||||| || | Sbjct 1034 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 975 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||||||||||||||||||||| ||||| || ||||| ||||| || ||||||||| Sbjct 974 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATTGT 915 Query 563412 ATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 || | | |||| | || || | || || || || | || || || ||||||| Sbjct 914 GTCCGACGCTTCCACATCCAAG-GTGATGGTCTTCCCGGTCAATGTCTTGACAAAAATTT 856 Query 563471 GCATA 563475 ||||| Sbjct 855 GCATA 851 Score = 114 bits (126), Expect = 1e-19 Identities = 99/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| ||||||| |||||| | ||| ||||| |||||||| || | Sbjct 806 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 747 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||||||||||||||||||||| ||||| || ||||| ||||| || |||||| || Sbjct 746 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGT 687 Query 563412 ATC 563414 || Sbjct 686 GTC 684 >seq2100 Length=597 Score = 120 bits (132), Expect = 2e-21 Identities = 139/185 (75%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| ||||||| |||||| | ||| ||||| |||||||| || | Sbjct 350 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 291 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||||||||||||||||||||| ||||| || ||||| ||||| || |||||| || Sbjct 290 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGT 231 Query 563412 ATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 || | | | || || || || | || || ||||| | ||| || || ||||| | Sbjct 230 GTCCG-ACGCTTCCACATCCAGGGTGATGGTCTTCCCAGTCAAAGTCTTGACAAAAATCT 172 Query 563471 GCATA 563475 ||||| Sbjct 171 GCATA 167 Score = 118 bits (130), Expect = 9e-21 Identities = 100/123 (81%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| ||||||| |||||| | ||| ||||| |||||||| || | Sbjct 578 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 519 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||||||||||||||||||||| ||||| || ||||| ||||| || ||||||||| Sbjct 518 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATTGT 459 Query 563412 ATC 563414 || Sbjct 458 GTC 456 Score = 113 bits (124), Expect = 4e-19 Identities = 97/120 (81%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| ||||||| |||||| | ||| ||||| |||||||| || | Sbjct 122 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 63 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||||||||||||||||||||| ||||| || ||||| ||||| || |||||| || Sbjct 62 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGT 3 >seq1543 Length=600 Score = 120 bits (132), Expect = 2e-21 Identities = 139/185 (75%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| ||||||| |||||| | ||| ||||| |||||||| || | Sbjct 2 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 61 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||||||||||||||||||||| ||||| || ||||| ||||| || |||||| || Sbjct 62 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGT 121 Query 563412 ATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 || | | | || || || || | || || ||||| | ||| || || ||||| | Sbjct 122 GTCCG-ACGCTTCCACATCCAGGGTGATGGTCTTCCCAGTCAAAGTCTTGACAAAAATCT 180 Query 563471 GCATA 563475 ||||| Sbjct 181 GCATA 185 Score = 114 bits (126), Expect = 1e-19 Identities = 99/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| ||||||| |||||| | ||| ||||| |||||||| || | Sbjct 458 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 517 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||||||||||||||||||||| ||||| || ||||| ||||| || |||||| || Sbjct 518 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGT 577 Query 563412 ATC 563414 || Sbjct 578 GTC 580 Score = 111 bits (122), Expect = 1e-18 Identities = 98/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| ||||||| |||||| | ||| || || |||||||| || | Sbjct 230 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTYCCCGCAAAAATCAGACG 289 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||||||||||||||||||||| ||||| || ||||| ||||| || |||||| || Sbjct 290 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGT 349 Query 563412 ATC 563414 || Sbjct 350 GTC 352 >seq470 Length=818 Score = 120 bits (132), Expect = 2e-21 Identities = 139/185 (75%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| ||||||| |||||| | ||| ||||| |||||||| || | Sbjct 375 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 434 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||||||||||||||||||||| ||||| || ||||| ||||| || ||||||||| Sbjct 435 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATTGT 494 Query 563412 ATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 || | | | || || || || | || || ||||| | ||| || || || || | Sbjct 495 GTCCG-ACGCTTCCACATCCAGGGTGATGGTCTTCCCAGTCAAAGTCTTGACAAAGATCT 553 Query 563471 GCATA 563475 ||||| Sbjct 554 GCATA 558 Score = 114 bits (126), Expect = 1e-19 Identities = 138/185 (75%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| ||||||| |||||| | ||| ||||| |||||||| || | Sbjct 147 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 206 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||||||||||||||||||||| ||||| || ||||| ||||| || |||||| || Sbjct 207 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGT 266 Query 563412 ATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 || | | | || || || || | || || ||||| | ||| || || || || | Sbjct 267 GTCCG-ACGCTTCCACATCCAGGGTGATGGTCTTCCCAGTCAAAGTCTTGACAAAGATCT 325 Query 563471 GCATA 563475 ||||| Sbjct 326 GCATA 330 Score = 114 bits (126), Expect = 1e-19 Identities = 138/185 (75%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| ||||||| |||||| | ||| || || |||||||| || | Sbjct 603 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTCCCCGCAAAAATCAGACG 662 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||||||||||||||||||||| ||||| || ||||| ||||| || ||||||||| Sbjct 663 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATTGT 722 Query 563412 ATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 || | | | || || || || | || || ||||| | ||| || || || || | Sbjct 723 GTCCG-ACGCTTCCACATCCAGGGTGATGGTCTTCCCAGTCAAAGTCTTGACAAAGATCT 781 Query 563471 GCATA 563475 ||||| Sbjct 782 GCATA 786 >seq826 Length=494 Score = 118 bits (130), Expect = 9e-21 Identities = 100/123 (81%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| ||||||| |||||| | ||| ||||| |||||||| || | Sbjct 414 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 355 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||||||||||||||||||||| ||||| || ||||| ||||| || ||||||||| Sbjct 354 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATTGT 295 Query 563412 ATC 563414 || Sbjct 294 GTC 292 Score = 114 bits (126), Expect = 1e-19 Identities = 99/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| ||||||| |||||| | ||| ||||| |||||||| || | Sbjct 186 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 127 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||||||||||||||||||||| ||||| || ||||| ||||| || |||||| || Sbjct 126 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGT 67 Query 563412 ATC 563414 || Sbjct 66 GTC 64 >seq3592 Length=385 Score = 114 bits (126), Expect = 1e-19 Identities = 99/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| ||||||| |||||| | ||| ||||| |||||||| || | Sbjct 134 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 75 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||||||||||||||||||||| ||||| || ||||| ||||| || |||||| || Sbjct 74 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGT 15 Query 563412 ATC 563414 || Sbjct 14 GTC 12 Score = 114 bits (126), Expect = 1e-19 Identities = 99/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| ||||||| |||||| | ||| ||||| |||||||| || | Sbjct 362 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 303 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||||||||||||||||||||| ||||| || ||||| ||||| || |||||| || Sbjct 302 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGT 243 Query 563412 ATC 563414 || Sbjct 242 GTC 240 >seq3538 Length=489 Score = 114 bits (126), Expect = 1e-19 Identities = 138/185 (75%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| ||||||| |||||| | ||| ||||| |||||||| || | Sbjct 24 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 83 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||||||||||||||||||||| ||||| || ||||| ||||| || |||||| || Sbjct 84 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGT 143 Query 563412 ATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 || | | | || || || || | || || ||||| | || || || ||||| | Sbjct 144 GTCCG-ACGCTTCCACATCCAGGGTGATGGTCTTCCCAGTCAATGTCTTGACAAAAATCT 202 Query 563471 GCATA 563475 ||||| Sbjct 203 GCATA 207 Score = 113 bits (124), Expect = 4e-19 Identities = 137/185 (74%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| ||||||| |||||| | ||| ||||| |||||||| || | Sbjct 252 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 311 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||||||||||||||||||||| ||||| || ||||| ||||| || | |||| || Sbjct 312 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCKCAATCGT 371 Query 563412 ATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 || | | | || || || || | || || ||||| | || || || ||||| | Sbjct 372 GTCCG-ACGCTTCCACATCCAGGGTGATGGTCTTCCCAGTCAATGTCTTGACAAAAATCT 430 Query 563471 GCATA 563475 ||||| Sbjct 431 GCATA 435 >seq2397 Length=4497 Score = 114 bits (126), Expect = 1e-19 Identities = 153/209 (73%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||| || || || | ||| || ||| ||| || ||||||||||||| ||||| | Sbjct 1994 GAGGCGCAGCACTAAATGCAGAGTAGATTCCTTCTGGATATTGTAATCAGACAGAGTACG 1935 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 | ||| || | ||| ||||| |||||||| | || |||||||| |||||||| ||||| Sbjct 1934 TCCATCCTCCAATTGCTTTCCAGCAAAAATCAATCGCTGCTGATCCGGAGGAATGCCTTC 1875 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT--ACATTCGAGA 563433 ||| ||||| ||||| ||||| || |||||| ||||| | | | | |||| | || Sbjct 1874 TTTGTCTTGGATTTTCTGTTTCACATTCTCAATGGTATCCGAG-GCTTCCACATCCAAG- 1817 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAAC 563462 || | || ||||||||||| || || || Sbjct 1816 GTGATGGTCTTACCAGTAAGGGTCTTGAC 1788 >seq263 Length=166476 Score = 89.7 bits (98), Expect = 4e-12 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||| || ||||| ||||| | ||| ||| || || ||||| || | |||||| | Sbjct 119179 GAGGCGCAGTACGAGATGTAAAGTAGATTCCTTCTGGATGTTGTAGTCCGATAGAGTACG 119120 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 | ||| || || || ||||||||||| || | || ||||||||||| || |||||||| Sbjct 119119 TCCATCCTCGAGCTGCTTTCCGGCAAAGATTAATCGCTGCTGATCAGGCGGGATTCCTTC 119060 Query 563376 TTTATCTTGAATTTTTTGTTTTAC 563399 ||||| || ||||| || || || Sbjct 119059 CTTATCCTGGATTTTCTGCTTAAC 119036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028869856618420