Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halocafeteria_20seosinensis_20[genbank_20GCA_5F001687465.1_202016- 07-19] 8,058 sequences; 44,620,845 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1110 172 4e-37 seq3664 122 6e-22 seq2100 118 7e-21 seq1543 118 7e-21 seq218 118 7e-21 seq3592 114 8e-20 seq3538 114 8e-20 seq826 114 8e-20 seq470 114 8e-20 seq256 113 3e-19 seq196 105 4e-17 seq80 104 2e-16 seq2397 100 2e-15 seq250 89.7 3e-12 >seq1110 Length=22515 Score = 172 bits (190), Expect = 4e-37 Identities = 462/698 (66%), Gaps = 19/698 (3%) Strand=Plus/Minus Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546 ||| | ||||| || || || || || || || | ||||| || |||||| || Sbjct 9148 CGTTTGAGAACCGCATGCGAGCGGGCAAAACGCACGCTTTCCTCAAGTACTCAGGCTTTC 9089 Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAA 475606 | ||| | || || || ||||||||| | ||||| | ||| |||| | ||| Sbjct 9088 ATCGAAATCGACTCACTCTTTGAAGGAGTAGATTACAGTACAACACTTACTCGTGCTCGT 9029 Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAA-ACAATTGAACCCGTTGAACAAGTTCT 475665 || ||||| || || || || ||| | || ||| || | || || || ||||||| Sbjct 9028 TTCGAAGAAATGTGCATGGA-CTATTTCAAGAAGACAGTTCAGCCTGTGGATAAAGTTCT 8970 Query 475666 CAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAAC 475725 | ||| | || | | |||| | | || |||||||| |||||||| |||||||| || Sbjct 8969 TCGCGATGCCAAGATGGGCAAAGGAGACGTACATGAAATCGTTCTTGTTGGAGGTTCTAC 8910 Query 475726 AAGAATTCCAAAAATAAGAGAA-ATGCTTTCATCATATTTTAATGGTAAA-AAGTTAAAT 475783 | || || || || |||| |||||||| ||||| ||||| || ||| | | Sbjct 8909 CCGTATCCCCAAGATCC-AGAATATGCTTTCTGAGTATTTCAATGGAAAGGAAGCT---T 8854 Query 475784 GAAAGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTT 475841 | ||| | | || ||||||||||| || || || |||||| | || ||||||||||| Sbjct 8853 GTAAGAGCATCAACCCTGATGAAGCCGTAGCCTACGGAGCTACAGTACAAGCAGCTATCC 8794 Query 475842 TATCAGGTCAATCAGAC------GAGAAACTAAATAATATTGTACTTGTTGACGTAACTC 475895 | | || | | ||| | |||| | || || | | || | || ||| ||| Sbjct 8793 TTGCTGG---AACTGACAAGGGAGGGAAATTGGATGATTTGTTGCTATTGGATGTAGCTC 8737 Query 475896 CACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATA 475955 | | || | ||||| ||||||| ||| || | ||||| | || ||| | |||| | Sbjct 8736 CTTTGTCCATGGGTCTCGAAACAGCTGGTGGTGTGATGACAACACTCATTCCCCGAAACA 8677 Query 475956 CTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTG 476015 | | || || ||||| || || | ||| ||||| || ||||| || ||| | || Sbjct 8676 CGACCATTCCCTGCAAGAAGACACAGACATTCTCCACATACTCTGACAACCAACCTGGTG 8617 Query 476016 TAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAA 476075 || || ||| | || || || ||| | | || || || || ||| || || | Sbjct 8616 TACTGATTCAAGTTTTCGAGGGAGAACGCTCTATGACCAAGGACAACAACCTTCTAGGGA 8557 Query 476076 CTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTT 476135 || |||| || |||||||| || || |||| |||| || ||||| ||||| | Sbjct 8556 AGTTCCATCTAGACGGTATTCCCCCCATGGCCCGAGGTATTCCCCAGATTGAGGTTACCT 8497 Query 476136 TTGATATTGATGCAAATGGTATTCTTAATGTTACTGCT 476173 |||||| ||||| |||||||||||||| || | |||| Sbjct 8496 ATGATATCGATGCGAATGGTATTCTTAACGTCAGTGCT 8459 >seq3664 Length=1078 Score = 122 bits (134), Expect = 6e-22 Identities = 137/181 (76%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| || |||| ||||||| |||||| | ||||||||| |||||||| ||||| Sbjct 806 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 747 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 ||| ||||||||||||||||||||||| || || || || ||||||||| ||||| || Sbjct 746 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGT 687 Query 480710 ATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTT 480768 || | | | | | ||| ||| || || || ||||| | ||||| || ||||||| Sbjct 686 GTCCGACGCTTCCACATCCAA-GGTGATGGTCTTCCCGGTCAATGTCTTGACAAAAATTT 628 Query 480769 G 480769 | Sbjct 627 G 627 Score = 122 bits (134), Expect = 6e-22 Identities = 137/181 (76%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| || |||| ||||||| |||||| | ||||||||| |||||||| ||||| Sbjct 1034 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 975 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 ||| ||||||||||||||||||||||| || || || || ||||||||| ||||| || Sbjct 974 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATTGT 915 Query 480710 ATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTT 480768 || | | | | | ||| ||| || || || ||||| | ||||| || ||||||| Sbjct 914 GTCCGACGCTTCCACATCCAA-GGTGATGGTCTTCCCGGTCAATGTCTTGACAAAAATTT 856 Query 480769 G 480769 | Sbjct 855 G 855 >seq2100 Length=597 Score = 118 bits (130), Expect = 7e-21 Identities = 134/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| || |||| ||||||| |||||| | ||||||||| |||||||| ||||| Sbjct 350 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 291 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 ||| ||||||||||||||||||||||| || || || || ||||||||| ||||| || Sbjct 290 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGT 231 Query 480710 ATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || | | || ||||| || || || || || | |||||| || ||||| || Sbjct 230 GTCCGACGCTTCCACATCCAGGGTGATGGTCTTCCCAGTCAAAGTCTTGACAAAAATCTG 171 Score = 114 bits (126), Expect = 8e-20 Identities = 99/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| || |||| ||||||| |||||| | ||||||||| |||||||| ||||| Sbjct 578 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 519 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 ||| ||||||||||||||||||||||| || || || || ||||||||| ||||| || Sbjct 518 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATTGT 459 Query 480710 ATC 480712 || Sbjct 458 GTC 456 Score = 113 bits (124), Expect = 3e-19 Identities = 97/120 (81%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| || |||| ||||||| |||||| | ||||||||| |||||||| ||||| Sbjct 122 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 63 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 ||| ||||||||||||||||||||||| || || || || ||||||||| ||||| || Sbjct 62 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGT 3 >seq1543 Length=600 Score = 118 bits (130), Expect = 7e-21 Identities = 134/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| || |||| ||||||| |||||| | ||||||||| |||||||| ||||| Sbjct 2 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 61 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 ||| ||||||||||||||||||||||| || || || || ||||||||| ||||| || Sbjct 62 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGT 121 Query 480710 ATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || | | || ||||| || || || || || | |||||| || ||||| || Sbjct 122 GTCCGACGCTTCCACATCCAGGGTGATGGTCTTCCCAGTCAAAGTCTTGACAAAAATCTG 181 Score = 114 bits (126), Expect = 8e-20 Identities = 99/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| || |||| ||||||| |||||| | ||||||||| |||||||| ||||| Sbjct 458 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 517 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 ||| ||||||||||||||||||||||| || || || || ||||||||| ||||| || Sbjct 518 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGT 577 Query 480710 ATC 480712 || Sbjct 578 GTC 580 Score = 111 bits (122), Expect = 1e-18 Identities = 98/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| || |||| ||||||| |||||| | |||||| || |||||||| ||||| Sbjct 230 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTYCCCGCAAAAATCAGACG 289 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 ||| ||||||||||||||||||||||| || || || || ||||||||| ||||| || Sbjct 290 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGT 349 Query 480710 ATC 480712 || Sbjct 350 GTC 352 >seq218 Length=95557 Score = 118 bits (130), Expect = 7e-21 Identities = 134/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| || |||| ||||||| |||||| | ||||||||| |||||||| ||||| Sbjct 87340 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 87281 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 ||| ||||||||||||||||||||||| || || || || ||||||||| ||||| || Sbjct 87280 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATTGT 87221 Query 480710 ATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || | | || ||||| || || || || || | ||||| || |||||||| Sbjct 87220 GTCCGACGCTTCCACATCCAGGGTGATGGTCTTCCCAGTCAATGTCTTGACAAAAATTTG 87161 Score = 109 bits (120), Expect = 4e-18 Identities = 98/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| || |||| ||||||| |||||| | |||||| || |||||||| ||||| Sbjct 87568 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCTAATTGCTTCCCCGCAAAAATCAGACG 87509 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 ||| ||||||||||||||||||||||| || || || || ||||||||| ||||| || Sbjct 87508 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGT 87449 Query 480710 ATC 480712 || Sbjct 87448 GTC 87446 >seq3592 Length=385 Score = 114 bits (126), Expect = 8e-20 Identities = 99/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| || |||| ||||||| |||||| | ||||||||| |||||||| ||||| Sbjct 134 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 75 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 ||| ||||||||||||||||||||||| || || || || ||||||||| ||||| || Sbjct 74 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGT 15 Query 480710 ATC 480712 || Sbjct 14 GTC 12 Score = 114 bits (126), Expect = 8e-20 Identities = 99/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| || |||| ||||||| |||||| | ||||||||| |||||||| ||||| Sbjct 362 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 303 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 ||| ||||||||||||||||||||||| || || || || ||||||||| ||||| || Sbjct 302 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGT 243 Query 480710 ATC 480712 || Sbjct 242 GTC 240 >seq3538 Length=489 Score = 114 bits (126), Expect = 8e-20 Identities = 99/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| || |||| ||||||| |||||| | ||||||||| |||||||| ||||| Sbjct 24 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 83 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 ||| ||||||||||||||||||||||| || || || || ||||||||| ||||| || Sbjct 84 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGT 143 Query 480710 ATC 480712 || Sbjct 144 GTC 146 Score = 111 bits (122), Expect = 1e-18 Identities = 90/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| || |||| ||||||| |||||| | ||||||||| |||||||| ||||| Sbjct 252 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 311 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACA 480698 ||| ||||||||||||||||||||||| || || || || ||||||||| Sbjct 312 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACA 360 >seq826 Length=494 Score = 114 bits (126), Expect = 8e-20 Identities = 99/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| || |||| ||||||| |||||| | ||||||||| |||||||| ||||| Sbjct 186 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 127 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 ||| ||||||||||||||||||||||| || || || || ||||||||| ||||| || Sbjct 126 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGT 67 Query 480710 ATC 480712 || Sbjct 66 GTC 64 Score = 114 bits (126), Expect = 8e-20 Identities = 99/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| || |||| ||||||| |||||| | ||||||||| |||||||| ||||| Sbjct 414 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 355 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 ||| ||||||||||||||||||||||| || || || || ||||||||| ||||| || Sbjct 354 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATTGT 295 Query 480710 ATC 480712 || Sbjct 294 GTC 292 >seq470 Length=818 Score = 114 bits (126), Expect = 8e-20 Identities = 99/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| || |||| ||||||| |||||| | ||||||||| |||||||| ||||| Sbjct 147 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 206 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 ||| ||||||||||||||||||||||| || || || || ||||||||| ||||| || Sbjct 207 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATCGT 266 Query 480710 ATC 480712 || Sbjct 267 GTC 269 Score = 114 bits (126), Expect = 8e-20 Identities = 99/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| || |||| ||||||| |||||| | ||||||||| |||||||| ||||| Sbjct 375 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTTCCCGCAAAAATCAGACG 434 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 ||| ||||||||||||||||||||||| || || || || ||||||||| ||||| || Sbjct 435 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATTGT 494 Query 480710 ATC 480712 || Sbjct 495 GTC 497 Score = 109 bits (120), Expect = 4e-18 Identities = 98/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| || |||| ||||||| |||||| | |||||| || |||||||| ||||| Sbjct 603 AATATTGTAGTCAGAAAGAGTTCGACCATCTTCCAATTGCTTCCCCGCAAAAATCAGACG 662 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 ||| ||||||||||||||||||||||| || || || || ||||||||| ||||| || Sbjct 663 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTCTGTTTGACATTCTCAATTGT 722 Query 480710 ATC 480712 || Sbjct 723 GTC 725 >seq256 Length=86806 Score = 113 bits (124), Expect = 3e-19 Identities = 534/831 (64%), Gaps = 27/831 (3%) Strand=Plus/Minus Query 475345 TGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGA 475404 |||| | ||| || | ||| || ||||| ||| ||||||| || || || || ||||| Sbjct 15478 TGGTATCTTCGAAGTGAAAGCCACTGCTGGTGATACACATCTCGGAGGGGAGGACTTTGA 15419 Query 475405 TAATAGACTTGTATCATGGTGTGTTGAAGATTTCAAGAGGAAAAAT---AAAGTTGATCT 475461 || | | | ||| | || || | || ||||||||||| || |||| ||| Sbjct 15418 TACCAAATTGGTAGACTTCTGCATTCAGGACTTCAAGAGGAAGCATCGCAAAGAC-ATCA 15360 Query 475462 TTC--AACATCTGCTAAAGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGA 475519 | ||| | | | || | | ||| | |||||||| || || ||||| |||||| Sbjct 15359 CTGGTAACCTTCGTTCAATCCGT----CGTTTGAGAACTGCCTGCGAGCGTGCGAAGCGA 15304 Query 475520 GCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGAT 475579 | || || || ||||| | | ||| | |||||||| |||||||||||||| Sbjct 15303 ACCCTCTCGTCCAGCACTCAGGCATTCATCGAAATCGATTCTCTCTTTGAAGGAATTGAC 15244 Query 475580 TATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAA 475639 || | || |||| | || || ||||| || || || ||||| ||| Sbjct 15243 TACAGCACCACAGTTACCCGTGCCCGCTTCGAAGAAATGTGCATGGACTACTTTAAGAAA 15184 Query 475640 ACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAG-TCCA 475698 || | |||| || ||| | || ||| | |||||| || ||| ||||| | | Sbjct 15183 ACTGTCCAACCAGTAGAAAAGGTACTCCGCGATTCTGGTGTTTCCAAGG-ACAAGGTAGA 15125 Query 475699 TGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAA-ATGCTTTCAT 475757 ||| || || | |||||||| || || | || || || || |||| |||||| Sbjct 15124 TGAGATCGTCTTAGTAGGAGGATCTACTCGTATCCCGAAGATCC-AGAACATGCTTGAGG 15066 Query 475758 CATATTTTAATGGTAAA-AAGTTAAATG--AAAGTGTAAATCCTGATGAAGCTGTTGCAT 475814 ||| || ||||| ||| ||| ||| ||| | || |||||||| |||||||| | Sbjct 15065 AATACTTCAATGGCAAAGAAGC---ATGCAAAAACATTAACCCTGATGAGGCTGTTGCTT 15009 Query 475815 ATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGG---TCAATCAGACGAGAAACTAAATA 475871 | |||||| || ||||||| |||||||| || | | | | | ||| || || Sbjct 15008 ACGGAGCTACTATCCAAGCGGCTATTTTGAGTGGCGGTGACACTGGAGGGAAGCTGGATG 14949 Query 475872 ATATTGTACTTGTTG-ACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATT 475930 | ||| |||| || |||| | || || || | ||| | ||||| | || || | Sbjct 14948 AC-TTGCTCTTGCTGGACGTTGCCCCTCTATCCCTCGGTTTGGAAACTGCCGGTGGTGTG 14890 Query 475931 ATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAA-AAAATCAAAAGTATTTTC 475989 ||||||| ||||| || | || || | ||||||||||| || | | ||| || || Sbjct 14889 ATGACTACGCTTATCGAACGTAACACAACCATCCCATGCAAGAAGAACCAAA-CCTTCTC 14831 Query 475990 CACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATT 476049 || ||| |||||||||| | ||| || || | ||||| ||||| | | Sbjct 14830 GACGTATGCTGATAATCAGCCTGGTGTGTTGATTCAGGTATTTGAGGGTGAGCGCTCTAT 14771 Query 476050 CACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAG 476109 || || || || ||| | || | || | | || || || || || || || Sbjct 14770 GACCAAGGACAACAACTTGTTGGGTAAGTTCCACTTGGATGGAATCCCACCCATGCCAAG 14711 Query 476110 AGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCT 476160 ||| ||| ||||| || || |||||||| |||| || |||||||| || Sbjct 14710 AGGCACTCCCCAAATCGAGGTCACTTTTGACGTTGACGCTAATGGTATCCT 14660 >seq196 Length=210786 Score = 105 bits (116), Expect = 4e-17 Identities = 319/482 (66%), Gaps = 12/482 (2%) Strand=Plus/Plus Query 475692 AAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAAT--AAGAGAAAT 475749 |||| |||| ||||| ||||| || || || || || ||||| ||| | || || || Sbjct 40672 AAGTAGATGAGATTGTACTTGTCGGTGGCTCTACCAGGATTCCGAAAGTGCAACAGCTAT 40731 Query 475750 GCTTTCATCA-TATTTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTG 475808 | | | || || ||||| || || |||| || | || || |||||||| | Sbjct 40732 ---TGAAGGACTACTTCAATGGCAAGGAGCCAAATCTCGGTATCAACCCAGATGAAGCCG 40788 Query 475809 TTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGA-GAAACTA 475867 | || || || || ||||| |||| || || | || ||| || | | || ||||| | Sbjct 40789 TCGCTTACGGTGCCGCTGTGCAAGGAGGAATCCTCTCCGGTGAAGCGAAAGAAGAAACCA 40848 Query 475868 AATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGG 475927 || | | | | || | || || || || |||||||| ||| ||||||| || || || Sbjct 40849 AAGACTTGT-TGCTGCTCGATGTGACACCCCTTTCATTGGGTATTGAAACCGTCGGTGGT 40907 Query 475928 ATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAA-ATCAAAAGTATT 475986 | ||||| || | || || | || ||| || ||| ||| || | | | | | || Sbjct 40908 GTAATGACCAAGTTAATCAACCGTAACACTGTCATTCCAACCAAGAAGAGCCAGACT-TT 40966 Query 475987 TTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAA 476046 ||||||| |||||||| || | || | ||||| | || | ||||||||| Sbjct 40967 CAGCACTTATCAGGATAATCAGCCAGCCGTCATGATCCAGGTTTTCCAGGGTGAAAGATC 41026 Query 476047 ATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCC 476106 | || || || || | || |||| ||| | || |||||||| || ||||| Sbjct 41027 CATGACCAAGGACAACCAGCTTCTAGGAAAATTTGAACTCAGCGGTATTCCACCGGCTCC 41086 Query 476107 CAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTA-ATG 476165 |||||| || || || ||||| || ||||| ||||| || || |||| ||||| ||| Sbjct 41087 CAGAGGCACACCCCAGATCGAAGTCACATTTGAAATTGACGCTAACGGTA-TCTTACATG 41145 Query 476166 TT 476167 || Sbjct 41146 TT 41147 >seq80 Length=198448 Score = 104 bits (114), Expect = 2e-16 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || || || || | ||| || ||| ||| || | ||| ||||||| |||||| Sbjct 77008 ACGGAGGCGCAGCACTAAATGCAGAGTAGATTCCTTCTGGATATTGTAATCAGATAGAGT 77067 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| || | ||| |||||||||||||| | || || |||||||||||||| || Sbjct 77068 ACGTCCATCCTCCAATTGTTTTCCAGCAAAAATCAATCGCTGCTGATCAGGAGGAATGCC 77127 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||| |||||||| || || ||||| ||| ||||| ||||| | | | || | Sbjct 77128 TTCTTTGTCTTGGATTTTCTGTTTCACATTCTCAATGGTATCCGAGGCTTCCACATCCAA 77187 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAAC 480760 ||| || || ||||| || || ||||| || Sbjct 77188 GGTGATGGTCTTACCAGTAAGGGTCTTGAC 77217 >seq2397 Length=4497 Score = 100 bits (110), Expect = 2e-15 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || || || || | ||| || ||| ||| || | ||| ||||||| ||||| Sbjct 1997 ACGGAGGCGCAGCACTAAATGCAGAGTAGATTCCTTCTGGATATTGTAATCAGACAGAGT 1938 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| || | |||||||||||||||||| | || || ||||| |||||||| || Sbjct 1937 ACGTCCATCCTCCAATTGCTTTCCAGCAAAAATCAATCGCTGCTGATCCGGAGGAATGCC 1878 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||| |||||||| || || ||||| ||| ||||| ||||| | | | || | Sbjct 1877 TTCTTTGTCTTGGATTTTCTGTTTCACATTCTCAATGGTATCCGAGGCTTCCACATCCAA 1818 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAAC 480760 ||| || || ||||| || || ||||| || Sbjct 1817 GGTGATGGTCTTACCAGTAAGGGTCTTGAC 1788 >seq250 Length=105897 Score = 89.7 bits (98), Expect = 3e-12 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||||||||| | |||||| || ||| || | ||| || || | ||||| Sbjct 9429 ACGGAGACGGAGTACCAAATGAAGAGTGGATTCCTTCTGGATATTGTAGTCGGAAAGAGT 9488 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| || | ||||||||||| ||||| | || || ||||| || ||||| || Sbjct 9489 GCGTCCATCCTCCAACTGCTTTCCAGCGAAAATCAATCGCTGCTGATCCGGTGGAATGCC 9548 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG 480714 ||||||||| || || || || |||||| ||| || || |||| Sbjct 9549 TTCCTTGTCCTGGATTTTCTGCTTGACATTTTCGATGGTGTCAG 9592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267833553282584