Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halocafeteria_20seosinensis_20[genbank_20GCA_5F001687465.1_202016- 07-19] 8,058 sequences; 44,620,845 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq7 84.2 2e-11 >seq7 Length=130303 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 110291 ACTTTAACCGGCAAAACCATTACCGTCGAAACGGA-GCCTGACGATACTGTCGGCCAGGT 110349 ||| | || || |||||||| ||| |||| ||| |||| ||| ||| ||| | || Sbjct 35703 ACTCTCACTGGTAAAACCATCACCCTCGATGTGGAAGCCTC-CGACACTATCGAGAACGT 35761 Query 110350 AAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGC 110409 || ||||| || |||||||||||| | || ||||| ||||| || |||| || Sbjct 35762 GAAGCAGAAAATCCAGGACAAAGAAGGCATCCCGCCTGATCAGCAAAGGCTCATTTTCGC 35821 Query 110410 GGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTAC 110469 || || |||||||| || | | | || | | || |||||||| || || ||||| || Sbjct 35822 AGGGAAGCAGCTGGAAGACGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAATCAAC 35881 Query 110470 GTTGCACATGGTGTT 110484 ||||| |||| || Sbjct 35882 CTTGCATTTGGTCTT 35896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412801056116594