Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halocafeteria_20seosinensis_20[genbank_20GCA_5F001687465.1_202016- 07-19] 8,058 sequences; 44,620,845 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq7 82.4 6e-11 >seq7 Length=130303 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 107574 ACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCGATACTGTCGGCCAGGTA 107633 ||| | || || |||||||| ||| |||| ||| || ||| ||| ||| | || Sbjct 35703 ACTCTCACTGGTAAAACCATCACCCTCGATGTGGAAGCCTCCGACACTATCGAGAACGTG 35762 Query 107634 AAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCG 107693 || || || || || ||||||||| | || |||||||| || || |||| || Sbjct 35763 AAGCAGAAAATCCAGGACAAAGAAGGCATCCCGCCTGATCAGCAAAGGCTCATTTTCGCA 35822 Query 107694 GGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCTACG 107753 || || |||||||| |||| | || | | ||||||||||| || ||||| || || Sbjct 35823 GGGAAGCAGCTGGAAGACGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAATCAACC 35882 Query 107754 TTGCACATGGTGTTG 107768 ||||| |||| ||| Sbjct 35883 TTGCATTTGGTCTTG 35897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398837627555962