Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halocafeteria_20seosinensis_20[genbank_20GCA_5F001687465.1_202016- 07-19] 8,058 sequences; 44,620,845 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq146 93.3 1e-13 >seq146 Length=179389 Score = 93.3 bits (102), Expect = 1e-13 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 279875 GATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGTTTCAAAAGAAAATTGGTA 279934 ||||| |||| ||| ||||||| || || | |||||||| |||||| | || || Sbjct 61280 GATGGACTGAAGCCTGCACAGCGGAAAGTTCTCTTCAGTTGCTTCAAACGGAACTTAAAG 61339 Query 279935 AAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAACATGCAGGTTATCATCAC 279994 || ||||| ||||||||| | || ||||||||||| || ||||| | || || || Sbjct 61340 AAAGAAATCAAGGTTGCTCAGCTTGCTGGTTATGTTTCGGAGCATGCTGCCTACCACCAT 61399 Query 279995 GGTGAAGCGTCTCTTCAAGGTGCTATTGTAGGTCTTGCCCAAGATTTTATGGCTTCAAAC 280054 || ||| ||| ||| | |||| || || | || || ||||| | | || ||| Sbjct 61400 GGCGAAATGTCACTTGCTGCAACTATCGTTGGGATGGCGCAGAATTTTGTAGGATCCAAC 61459 Query 280055 AACTTAAATCTGCTTTCACCAAATGGTCAATTTGGT 280090 ||| | || ||||| |||| ||||| |||||| Sbjct 61460 AACCTGAACCTGCTGGTACCATCCGGTCAGTTTGGT 61495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186690269737738