Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halocafeteria_20seosinensis_20[genbank_20GCA_5F001687465.1_202016- 07-19] 8,058 sequences; 44,620,845 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1217 87.8 2e-12 >seq1217 Length=25202 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/155 (74%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 131333 GCCAGATTACAAACTGCCGTTTCGTCATAATCGCAATACTGAACAATTTCGGCGCACAAA 131392 || ||||| || ||||| || || || | || |||| |||||||||| ||||| Sbjct 14875 GCAAGATTGCAGACTGCTGTCTCATCTGGAGCGGTGTACTCTACAATTTCGGTACACAAG 14934 Query 131393 TTACTGCTCTTTATGGTGCCCAAATTTTGTTGATTGCTTTTAGCATT-CACATGGTCCTT 131451 || || ||| || || || | |||||||||||||||||| ||||| ||| ||||| Sbjct 14935 TTGGAGCACTTGATTGTACCAAGATTTTGTTGATTGCTTTTCGCATTGCAC-GAATCCTT 14993 Query 131452 GTACATCATGTAGGGCGTGCCCGTTTCGACTTGAG 131486 ||| | ||| || || ||||| ||||| | ||||| Sbjct 14994 GTAGAGCATATACGGAGTGCCTGTTTCAATTTGAG 15028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424892668520496