Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Halocafeteria_20seosinensis_20[genbank_20GCA_5F001687465.1_202016-
07-19] 8,058 sequences; 44,620,845 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq2100 158 1e-33
seq3538 150 2e-31
seq470 150 2e-31
seq1543 149 5e-31
seq826 149 5e-31
seq3664 145 7e-30
seq218 140 3e-28
seq2349 134 1e-26
seq3592 131 1e-25
seq7 127 2e-24
seq80 113 4e-20
seq2397 109 5e-19
>seq2100
Length=597
Score = 158 bits (174), Expect = 1e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||| |||| || ||| | || || || || |||||| ||||
Sbjct 168 ATGCAGATTTTTGTCAAGACTTTGACTGGGAAGACCATCACCCTGGATGTGGAAGCGTCG 227
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| ||||||||| |||||||| ||||| || || || ||||| || || || |||||
Sbjct 228 GACACGATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 287
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | || || || ||||||||||| || || |||| || |||||
Sbjct 288 CAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 347
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| ||||| ||||| | || ||||| |||||| | || ||||| ||
Sbjct 348 ATTCAGAAGGAATCGACTCTCCACTTGGTCTTGCGTCTCCGAGGTGGTAT 397
Score = 131 bits (144), Expect = 1e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || |||| || ||| | || || || || |||||| ||||
Sbjct 396 ATGCAGATCTTTGTCAAGACATTGACTGGGAAGACCATCACCCTGGATGTGGAAGCGTCG 455
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| |||||||| ||||| || || || ||||| || || || |||||
Sbjct 456 GACACAATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 515
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | || || || ||||||||||| || || |||| || |||||
Sbjct 516 CAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 575
Query 27168 ATTCAAAAGGAGTCGAC 27184
||||| ||||| |||||
Sbjct 576 ATTCAGAAGGAATCGAC 592
Score = 107 bits (118), Expect = 2e-18
Identities = 125/169 (74%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 27049 ACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAAC 27108
|| ||||||||| |||||||| ||||| || || || ||||| || || || ||||| |
Sbjct 1 ACACGATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAGC 60
Query 27109 AGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACA 27168
| ||| | || | || || || ||||||||||| || || |||| || ||||| |
Sbjct 61 AACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAATA 120
Query 27169 TTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||| ||||| || || | || ||||| |||||| | || ||||| ||
Sbjct 121 TTCAGAAGGAATCAACTCTCCACTTGGTCTTGCGTCTCCGAGGTGGTAT 169
>seq3538
Length=489
Score = 150 bits (166), Expect = 2e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || |||| || ||| | || || || || |||||| ||||
Sbjct 434 ATGCAGATTTTTGTCAAGACATTGACTGGGAAGACCATCACCCTGGATGTGGAAGCGTCG 375
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||||| || |||||||| ||||| || || || ||||| || || || |||||
Sbjct 374 GACACGATTGMGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 315
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | || || || ||||||||||| || || |||| || |||||
Sbjct 314 CAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 255
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| ||||| ||||| | || ||||| |||||| | || ||||| ||
Sbjct 254 ATTCAGAAGGAATCGACTCTCCACTTGGTCTTGCGTCTCCGAGGTGGTAT 205
Score = 134 bits (148), Expect = 1e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || |||| || ||| | || || || || |||||| ||||
Sbjct 206 ATGCAGATTTTTGTCAAGACATTGACTGGGAAGACCATCACCCTGGATGTGGAAGCGTCG 147
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| ||||||||| |||||||| ||||| || || || ||||| || || || |||||
Sbjct 146 GACACGATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 87
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | || || || ||||||||||| || || |||| || |||||
Sbjct 86 CAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 27
Query 27168 ATTCAAAAGGAGTCGAC 27184
||||| ||||| |||||
Sbjct 26 ATTCAGAAGGAATCGAC 10
>seq470
Length=818
Score = 150 bits (166), Expect = 2e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||| |||| || ||| | || || || || |||||| ||||
Sbjct 329 ATGCAGATCTTTGTCAAGACTTTGACTGGGAAGACCATCACCCTGGATGTGGAAGCGTCG 270
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| ||||||||| |||||||| ||||| || || || ||||| || || || |||||
Sbjct 269 GACACGATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 210
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | || || || ||||||||||| || || |||| || |||||
Sbjct 209 CAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 150
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| | ||||| || || | || ||||| |||||| | || ||||| ||
Sbjct 149 ATTYAGAAGGAATCAACTCTCCACTTGGTCTTGCGTCTCCGAGGTGGTAT 100
Score = 149 bits (164), Expect = 5e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||| |||| || ||| | || || || || |||||| ||||
Sbjct 557 ATGCAGATCTTTGTCAAGACTTTGACTGGGAAGACCATCACCCTGGATGTGGAAGCGTCG 498
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| |||||||| ||||| || || || ||||| || || || |||||
Sbjct 497 GACACAATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 438
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | || || || ||||||||||| || || |||| || |||||
Sbjct 437 CAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 378
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| ||||| || || | || ||||| |||||| | || ||||| ||
Sbjct 377 ATTCAGAAGGAATCAACTCTCCACTTGGTCTTGCGTCTCCGAGGTGGTAT 328
Score = 149 bits (164), Expect = 5e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||| |||| || ||| | || || || || |||||| ||||
Sbjct 785 ATGCAGATCTTTGTCAAGACTTTGACTGGGAAGACCATCACCCTGGATGTGGAAGCGTCG 726
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| |||||||| ||||| || || || ||||| || || || |||||
Sbjct 725 GACACAATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 666
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | || || || ||||||||||| || || |||| || |||||
Sbjct 665 CAACGTCTGATTTTTGCGGGGAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 606
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| ||||| || || | || ||||| |||||| | || ||||| ||
Sbjct 605 ATTCAGAAGGAATCAACTCTCCACTTGGTCTTGCGTCTCCGAGGTGGTAT 556
>seq1543
Length=600
Score = 149 bits (164), Expect = 5e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || |||| || ||| | || || || || |||||| ||||
Sbjct 412 ATGCAGATCTTTGTCAAGACATTGACTGGGAAGACCATCACCCTGGATGTGGAAGCGTCG 353
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| ||||||||| |||||||| ||||| || || || ||||| || || || |||||
Sbjct 352 GACACGATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 293
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | || || || ||||||||||| || || |||| || |||||
Sbjct 292 CAACGTCTGATTTTTGCGGGRAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 233
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| ||||| || || | || ||||| |||||| | || ||||| ||
Sbjct 232 ATTCAGAAGGAATCAACTCTCCACTTGGTCTTGCGTCTCCGAGGTGGTAT 183
Score = 125 bits (138), Expect = 6e-24
Identities = 138/184 (75%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||| |||| || ||| | || || || || |||||| ||||
Sbjct 184 ATGCAGATTTTTGTCAAGACTTTGACTGGGAAGACCATCACCCTGGATGTGGAAGCGTCG 125
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| ||||||||| |||||||| ||||| || || || ||||| || || || |||||
Sbjct 124 GACACGATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 65
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | || || || ||||||||||| || || |||| || |||||
Sbjct 64 CAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 5
Query 27168 ATTC 27171
||||
Sbjct 4 ATTC 1
Score = 123 bits (136), Expect = 2e-23
Identities = 140/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 27030 CTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAA 27089
|| || |||||| |||| ||| ||||||||| |||||||| ||||| || || || |||
Sbjct 598 CTGGATGTGGAAGCGTCGGACACGATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAA 539
Query 27090 GGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCG 27149
|| || || || ||||| || ||| | || | || || || ||||||||||| ||
Sbjct 538 GGAATTCCTCCTGATCAGCAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGA 479
Query 27150 ACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGG 27209
|| |||| || ||||| ||||| ||||| || || | || ||||| |||||| | ||
Sbjct 478 ACTCTTTCTGACTACAATATTCAGAAGGAATCAACTCTCCACTTGGTCTTGCGTCTCCGA 419
Query 27210 GGTGGCAT 27217
||||| ||
Sbjct 418 GGTGGTAT 411
>seq826
Length=494
Score = 149 bits (164), Expect = 5e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || |||| || ||| | || || || || |||||| ||||
Sbjct 4 ATGCAGATCTTTGTCAAGACATTGACTGGGAAGACCATCACCCTGGATGTGGAAGCGTCG 63
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| ||||||||| |||||||| ||||| || || || ||||| || || || |||||
Sbjct 64 GACACGATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 123
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | || || || ||||||||||| || || |||| || |||||
Sbjct 124 CAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 183
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| ||||| || || | || ||||| |||||| | || ||||| ||
Sbjct 184 ATTCAGAAGGAATCAACTCTCCACTTGGTCTTGCGTCTCCGAGGTGGTAT 233
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || ||||||| ||| | || || | || |||||| ||||
Sbjct 232 ATGCAGATCTTTGTCAAGACATTGACCGGGAAGACCATCACCTTGGATGTGGAAGCGTCG 291
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| |||||||| ||||| || || || ||||| || || || |||||
Sbjct 292 GACACAATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 351
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | || || || ||||||||||| || || |||| || |||||
Sbjct 352 CAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 411
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| ||||| || || | || ||||| |||||| | || |||||
Sbjct 412 ATTCAGAAGGAATCAACTCTCCACTTGGTCTTGCGTCTCCGAGGTGG 458
>seq3664
Length=1078
Score = 145 bits (160), Expect = 7e-30
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || || ||||||| ||| | || || | || |||||| ||||
Sbjct 624 ATGCAAATTTTTGTCAAGACATTGACCGGGAAGACCATCACCTTGGATGTGGAAGCGTCG 683
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| ||||||||| |||||||| ||||| || || || ||||| || || || |||||
Sbjct 684 GACACGATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 743
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | || || || ||||||||||| || || |||| || |||||
Sbjct 744 CAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 803
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| ||||| || || | || ||||| |||||| | || ||||| ||
Sbjct 804 ATTCAGAAGGAATCAACTCTCCACTTGGTCTTGCGTCTCCGAGGTGGTAT 853
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || || ||||||| ||| | || || | || |||||| ||||
Sbjct 852 ATGCAAATTTTTGTCAAGACATTGACCGGGAAGACCATCACCTTGGATGTGGAAGCGTCG 911
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| |||||||| ||||| || || || ||||| || || || |||||
Sbjct 912 GACACAATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 971
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | || || || ||||||||||| || || |||| || |||||
Sbjct 972 CAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 1031
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| ||||| || || | || ||||| |||||| | || |||||
Sbjct 1032 ATTCAGAAGGAATCAACTCTCCACTTGGTCTTGCGTCTCCGAGGTGG 1078
>seq218
Length=95557
Score = 140 bits (154), Expect = 3e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || || |||| || ||| | || || || || |||||| ||||
Sbjct 87158 ATGCAAATTTTTGTCAAGACATTGACTGGGAAGACCATCACCCTGGATGTGGAAGCGTCG 87217
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| |||||||| ||||| || || || ||||| || || || |||||
Sbjct 87218 GACACAATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 87277
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | || || || ||||||||||| || || |||| || |||||
Sbjct 87278 CAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 87337
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| ||||| || || | || ||||| |||||| | || ||||| ||
Sbjct 87338 ATTCAGAAGGAATCAACTCTCCACTTGGTCTTGCGTCTCCGAGGTGGTAT 87387
>seq2349
Length=20186
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 27006 ACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTC 27065
||| ||||||||||| | || || || || ||||| | || || | ||||||| ||
Sbjct 7678 ACTTTGACCGGCAAGACCATCACACTGGATGTGGAGGCCTCTGATACCATTGAGAACGTG 7619
Query 27066 AAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCC 27125
||||| ||||| || || || |||||||| || || ||||| ||||| || |||| |||
Sbjct 7618 AAACAGAAAATCCAGGATAAGGAAGGCATCCCTCCGGATCAGCAGCGATTGATATTCGCT 7559
Query 27126 GGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACC 27185
|| |||||||||||||| | || | |||||||| ||||| || || ||||| ||
Sbjct 7558 GGTAAACAATTGGAAGATGGGCGTACTTTGTCCGATTATAACATCCAGAAAGAGTCCACA 7499
Query 27186 TTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || ||||| | ||| |||| || ||
Sbjct 7498 TTGCACTTGGTGCTCCGTCTGCGAGGAGG 7470
>seq3592
Length=385
Score = 131 bits (144), Expect = 1e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||| |||| || ||| | || || | || |||||| ||||
Sbjct 180 ATGCAGATCTTTGTCAAGACTTTGACTGGGAAGACCATCACCTTGGACGTGGAAGCGTCG 239
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| ||||||||| |||||||| ||||| || || || ||||| || || || |||||
Sbjct 240 GACACGATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 299
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | || || || ||||||||||| || || |||| || |||||
Sbjct 300 CAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTTCTGACTACAAT 359
Query 27168 ATTCAAAAGGAGTCGAC 27184
||||| ||||| || ||
Sbjct 360 ATTCAGAAGGAATCAAC 376
Score = 120 bits (132), Expect = 3e-22
Identities = 135/181 (75%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 27037 TGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATAC 27096
||||| |||| ||| ||||||||| |||||||| ||||| || || || ||||| || |
Sbjct 1 TGGAAGCGTCGGACACGATTGAGAATGTCAAACAGAAAATCCAGGATAAGGAAGGAATTC 60
Query 27097 CACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTT 27156
| || ||||| || ||| | || | || || || ||||||||||| || || |||
Sbjct 61 CTCCTGATCAGCAACGTCTGATTTTTGCGGGAAAGCAATTGGAAGATGGTCGAACTCTTT 120
Query 27157 CCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216
| || ||||| ||||| ||||| || || | || ||||| |||||| | || ||||| |
Sbjct 121 CTGACTACAATATTCAGAAGGAATCAACTCTCCACTTGGTCTTGCGTCTCCGAGGTGGTA 180
Query 27217 T 27217
|
Sbjct 181 T 181
>seq7
Length=130303
Score = 127 bits (140), Expect = 2e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 27006 ACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTC 27065
||||| || || || | || || || || |||||| | |||||| | || |||| ||
Sbjct 35703 ACTCTCACTGGTAAAACCATCACCCTCGATGTGGAAGCCTCCGACACTATCGAGAACGTG 35762
Query 27066 AAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCC 27125
|| || ||||| || |||||||||||||| || || ||||| || | | || | |||
Sbjct 35763 AAGCAGAAAATCCAGGACAAAGAAGGCATCCCGCCTGATCAGCAAAGGCTCATTTTCGCA 35822
Query 27126 GGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACC 27185
|| || || |||||||| | || | ||||| |||||||| || ||||| || |||
Sbjct 35823 GGGAAGCAGCTGGAAGACGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAATCAACC 35882
Query 27186 TTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|| |||||||| |||||| | || ||||||
Sbjct 35883 TTGCATTTGGTCTTGCGTCTTCGTGGTGGC 35912
>seq80
Length=198448
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059
|| || || || || || ||| | || || | || |||||| | || || | ||||||
Sbjct 77217 GTCAAGACCCTTACTGGTAAGACCATCACCTTGGATGTGGAAGCCTCGGATACCATTGAG 77158
Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119
| || ||||| ||||| ||||||||||||||||| || || ||||| ||||| || ||
Sbjct 77157 AATGTGAAACAGAAAATCCAAGACAAAGAAGGCATTCCTCCTGATCAGCAGCGATTGATT 77098
Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179
| || || ||||||||||| || | || | || |||||||| || || |||||
Sbjct 77097 TTTGCTGGAAAACAATTGGAGGATGGACGTACTCTATCTGATTACAATATCCAGAAGGAA 77038
Query 27180 TCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || | ||||| || |||| | || |||||
Sbjct 77037 TCTACTCTGCATTTAGTGCTGCGCCTCCGTGGTGG 77003
>seq2397
Length=4497
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059
|| || || || || || ||| | || || | || |||||| | || || | ||||||
Sbjct 1788 GTCAAGACCCTTACTGGTAAGACCATCACCTTGGATGTGGAAGCCTCGGATACCATTGAG 1847
Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119
| || ||||| ||||| ||||||||||||||||| || || ||||| ||||| || ||
Sbjct 1848 AATGTGAAACAGAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAGCAGCGATTGATT 1907
Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179
| || || || |||||||| || | || | || |||||||| || || |||||
Sbjct 1908 TTTGCTGGAAAGCAATTGGAGGATGGACGTACTCTGTCTGATTACAATATCCAGAAGGAA 1967
Query 27180 TCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || | ||||| || |||| | || |||||
Sbjct 1968 TCTACTCTGCATTTAGTGCTGCGCCTCCGTGGTGG 2002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434874592844160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |