Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halocafeteria_20seosinensis_20[genbank_20GCA_5F001687465.1_202016- 07-19] 8,058 sequences; 44,620,845 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq3664 86.0 5e-12 >seq3664 Length=1078 Score = 86.0 bits (94), Expect = 5e-12 Identities = 151/219 (69%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 101027 AACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCT 101086 || |||| ||| | ||||||||| || ||||||||||| || | | |||| |||| Sbjct 835 AAGACCAAGTGGAGAGTTGATTCCTTCTGAATATTGTAGTCAGAAAGAGTTCGACCATCT 776 Query 101087 TCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCG 101146 |||||||| || |||||| | || || | ||| || || || | ||||| || || Sbjct 775 TCCAATTGCTTTCCCGCAAAAATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTATCC 716 Query 101147 GCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT---GTTTCGACGGTAATA 101203 ||||| ||||| |||| | | ||| || |||| | || | ||| || Sbjct 715 TGGATTTTCTGTTTGACATTCTCAATCGTGTC---CGACGCTTCCACATCCAAGGTGATG 659 Query 101204 GTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATTATT 101242 || || || |||||||| || | ||||||||||||| || Sbjct 658 GTCTTCCCGGTCAATGTCTTGACAAAAATTTGCATTGTT 620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409620568493022