Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq4375 91.5 1e-13 >seq4375 Length=1004 Score = 91.5 bits (100), Expect = 1e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 139573 CTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATA 139632 ||| || || ||||| ||||| || ||||| || || ||||| || |||||| | Sbjct 31 CTCCTTCTGGATGTTGTAATCAGACAGTGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAA 90 Query 139633 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTG 139692 ||||||||| ||||| || || || ||||| || ||||| || || || || | | Sbjct 91 GATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTT 150 Query 139693 TTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTAC 139752 || | ||||| | ||||| || || | || | ||||||||||||| || || || Sbjct 151 GTCAATAGTGTCAGATGGCTCAACATCNAGAGTGATGGTCTTGCCGGTCAGTGTCTTCAC 210 Query 139753 GAATATTTGCAT 139764 ||| || ||||| Sbjct 211 GAAGATCTGCAT 222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495930130928800