Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq17042 89.7 6e-13 >seq17042 Length=860 Score = 89.7 bits (98), Expect = 6e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| ||| ||| ||||| || |||||| ||| || ||||| |||||||| || Sbjct 497 GGCAAAGTCTGTGTGCAGACCTTCATCACGGCTGATAAGCTCATTGCTGAAGCACAAGCC 556 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||| | ||| |||||||| | ||| || || ||||| || || ||||||||| Sbjct 557 AGGCATCATACCACGCTTCTTGAGCCAAAAGATAGCACAGAAGCTGCCACTGAAGAAGAT 616 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAA 126224 || || || || || || | | ||||||||||| | || || || | |||| Sbjct 617 ACCTTCTACTGCAGCAAAGGCCACCAATCGCTCAGCAAA-GCTTGCTACCTTCTCATCAA 675 Query 126225 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCT 126272 ||||| ||| ||||| ||||| || | ||| ||||| |||| Sbjct 676 ACCACCTCAGTGCCCAGCTTGCCTTCTTGGTCACACAAGGGACAGTCT 723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597192396664120