Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq17042 123 3e-23 seq4457 89.7 6e-13 >seq17042 Length=860 Score = 123 bits (136), Expect = 3e-23 Identities = 183/257 (71%), Gaps = 2/257 (1%) Strand=Plus/Minus Query 102076 CTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGG 102135 ||||||||| |||| || | || || | || || || ||| | ||||| || Sbjct 753 CTGAGAAGAGCAAGCTGTTCAATGCTATTGAGACTGTCCCTTGTGTGACCAAGAAGGCAA 694 Query 102136 ATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCA 102194 ||||| ||| |||||||||| | || || || | |||||||||||| | | || Sbjct 693 GCTGGGCACTGAGGTGGTTTGATGAGAAGGTAGCAAGC-TTTGCTGAGCGATTGGTGGCC 635 Query 102195 TTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAG 102254 ||||| || || |||||||||||| ||| |||||| ||||| | |||||||||| Sbjct 634 TTTGCTGCAGTAGAAGGTATCTTCTTCAGTGGCAGCTTCTGTGCTATCTTTTGGCTCAAG 575 Query 102255 AAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGA 102314 ||||| ||| | ||||| || | |||||| ||| ||||||||| ||||| || || Sbjct 574 AAGCGTGGTATGATGCCTGGCTTGTGCTTCAGCAATGAGCTTATCAGCCGTGATGAAGGT 515 Query 102315 CTCCACCAAGAGTTTGC 102331 || ||| ||| ||||| Sbjct 514 CTGCACACAGACTTTGC 498 >seq4457 Length=2808 Score = 89.7 bits (98), Expect = 6e-13 Identities = 124/171 (73%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 15936 TTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAA 15995 || || || |||||||||| | |||| | | ||||| |||||||| || || | | Sbjct 500 TTGGTAGCAGCGATGACAATGACGCCTGGGTTGCCCTCAAAGCCATCCATTTCAGTTAGA 559 Query 15996 AGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACC-ACCAGCACTGCGTTG 16054 | |||||| | || || || || |||||||| || || | |||||||| || || Sbjct 560 ATCTGGTTGAGTGTCTGCTCACGCTCATCATT-GCCACCAGCCATACCAGCACCACGCTG 618 Query 16055 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTC 16105 || || |||||||||||||||||||||| |||||||||| ||| || Sbjct 619 ACGGCCTACAGCATCAATCTCATCAATGAAGATGATGCATGGTGCATTCTC 669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620574884904080