Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq17042 98.7 1e-15 >seq17042 Length=860 Score = 98.7 bits (108), Expect = 1e-15 Identities = 182/260 (70%), Gaps = 9/260 (3%) Strand=Plus/Plus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| ||| || || |||||||| || ||| |||||||| |||||||| | || Sbjct 497 GGCAAAGTCTGTGTGCAGACCTTCATCACGGCTGATAAGCTCATTGCTGAAGCACAAGCC 556 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 |||||| | || | ||||| ||||||||||| ||||| || || ||| |||||||| Sbjct 557 AGGCATCATACCACGCTTCTTGAGCCAAAAGATAGCACAGAAGCTGCCACTGAAGAAGAT 616 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGA----CTTGTCGA 119670 || || || || || || | | |||||||| |||| | | | || || | Sbjct 617 ACCTTCTACTGCAGCAAAGGCCACCAATCGCTCAGC-AAAGCTTGCTACCTTCTCATCAA 675 Query 119671 ACCACTTGAGAGCCCAGTTGGCCTT-ACGCTCTATGCAGGGGACAGTTTGGATGGCTTCG 119729 ||||| | || |||||| | ||||| | || | || |||||||| | || || | | Sbjct 676 ACCACCTCAGTGCCCAGCTTGCCTTCTTGGTC-ACACAAGGGACAGTCTCAATAGCATTG 734 Query 119730 AAAAG-TTGCTTCTTTTCAG 119748 || || |||| |||| |||| Sbjct 735 AACAGCTTGC-TCTTCTCAG 753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588817057464200