Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq18313 120 7e-22 seq18312 100 6e-16 >seq18313 Length=2265 Score = 120 bits (132), Expect = 7e-22 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| |||||| ||| || || || ||||| ||| ||||| | ||||| ||| Sbjct 2116 ACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCG 2175 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || || || || || ||||| || ||||| || Sbjct 2176 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGG 2235 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 || || ||||||||||| ||||||||||| Sbjct 2236 ATCTTCTGCTTGACGTTGTCAATGGTGTC 2264 >seq18312 Length=2245 Score = 100 bits (110), Expect = 6e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| |||||| ||| || || || ||||| ||| ||||| | ||||| ||| Sbjct 2111 ACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCG 2170 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || || || || || ||||| || ||||| || Sbjct 2171 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGG 2230 Query 195052 ATTTTTTGCTTGACG 195066 || || ||||||||| Sbjct 2231 ATCTTCTGCTTGACG 2245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109174707334763