Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= NC_021309.1 Length=74711 Score E Sequences producing significant alignments: (Bits) Value seq6396 84.2 1e-11 >seq6396 Length=4265 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/194 (70%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 64989 TCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGA 65048 |||||| |||| ||| |||||||| || || || || || ||| || | | ||| Sbjct 3090 TCAGCCTGACAGTGGTGAGCAGGCTCTAGACATTGTGGAGACCCTTGTGAGGAGCGGCT- 3032 Query 65049 GCTGTCCATC--GTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAA 65106 |||| || || || |||||||||||||| || || ||||| ||||| ||||| || Sbjct 3031 -CTGTGGATGTGGTTGTTGTTGACTCTGTGGCAGCACTTGTGCCACGCGCTGAGCTTGAT 2973 Query 65107 GGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGC 65166 || ||||| ||||| || || | ||||| || ||||| ||| || || || | Sbjct 2972 GGTGACATGGGGGATCACCATGTGGCGCTGCAAGCACGCCTTATGAGCCAAGCACTGAGA 2913 Query 65167 AAGCTCACTGGCAC 65180 || ||||| || || Sbjct 2912 AAACTCACAGGTAC 2899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238887528341488