Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq4375 98.7 1e-15 seq1251 87.8 2e-12 >seq4375 Length=1004 Score = 98.7 bits (108), Expect = 1e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 137221 TCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAG 137280 || || || ||||||||||| || ||||| || || || || || |||||| || Sbjct 32 TCCTTCTGGATGTTGTAATCAGACAGTGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAG 91 Query 137281 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGT 137340 |||||||| ||||| || || || ||||| || ||||| ||| || || || | | Sbjct 92 ATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTG 151 Query 137341 TCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACG 137400 || | ||||| | || || || || | ||| | ||||||||||||| ||| || ||| Sbjct 152 TCAATAGTGTCAGATGGCTCAACATCNAGAGTGATGGTCTTGCCGGTCAGTGTCTTCACG 211 Query 137401 AATATTTGCAT 137411 || || ||||| Sbjct 212 AAGATCTGCAT 222 >seq1251 Length=1604 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 137221 TCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAG 137280 || || || |||||||||||| || |||| || || || || || ||||| || Sbjct 1308 TCCTTCTGGATGTTGTAATCGGACAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAG 1367 Query 137281 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGT 137340 |||||||| ||||| || || || ||||| || ||||| ||| || || || | | Sbjct 1368 ATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTG 1427 Query 137341 TCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACG 137400 || | ||||| | || || || |||| ||| | || |||||||||| ||| || || Sbjct 1428 TCGATGGTGTCAGATGGCTCAACATCAAGAGTGATGGTTTTGCCGGTCAGTGTCTTGACA 1487 Query 137401 AATATTTGCAT 137411 || || ||||| Sbjct 1488 AAGATCTGCAT 1498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488412160294800