Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1251 105 2e-17 >seq1251 Length=1604 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || || || || ||||| |||||| | || || || |||||| Sbjct 1495 CAGATCTTTGTCAAGACACTGACCGGCAAAACCATCACTCTTGATGTTGAGCCATCTGAC 1436 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||||| |||||||| || || || || || || ||| || Sbjct 1435 ACCATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCACCTGACCAGCAG 1376 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||| || |||||| | || ||||| | ||| || ||||||||||| || Sbjct 1375 CGTCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTGTCCGATTACAACATC 1316 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||| ||||| ||||| || Sbjct 1315 CAGAAGGAGAGCACTCTGCACCTGGT 1290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181493897656469