Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq12022 116 4e-21 >seq12022 Length=1470 Score = 116 bits (128), Expect = 4e-21 Identities = 240/356 (67%), Gaps = 6/356 (2%) Strand=Plus/Minus Query 147469 GCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGG 147528 ||||| ||||| || ||| ||| || ||| |||||| ||| | || ||||||| Sbjct 835 GCCAGGTTGCACACAGCCACCTCCTCTGCGCTAGTGTACTCCACAACCTCACAGCACAGG 776 Query 147529 TTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTG 147588 ||||||| || || ||||| || ||||| ||||| |||| |||||| || || ||| Sbjct 775 TTGCTGCTCTTGATTGTGCCCAAGTTCTGCTGGTTGCTCTTCCCATTGCAGGCATCCTTG 716 Query 147589 AAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTAT---GCAGG 147645 | | |||||| || ||| ||||| | || | || | ||| ||| | || | Sbjct 715 TACATCATGTAGGGGGTGCCTGTCTCAATCTGGGCATCTAGGAT---CCTGTACCACAAG 659 Query 147646 TCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGC 147705 ||||| |||| ||| || || | | |||||| |||||| || ||||| | Sbjct 658 TCCTGAGCTCTCACGCGGCGCACAAACTTGCCCTCTGCTTCGTAGCGAGTGTACAGCTCT 599 Query 147706 TCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGAC 147765 || || || | ||| |||| || ||||| || || ||||| || || ||||||| || Sbjct 598 TCGAAATCTTTGCCCCAGCAGTCTGCAAGCCCAGGGCACTGGTGTGGGCACATCAAGCAC 539 Query 147766 CACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTA 147821 || |||| || | ||||| |||| || || || || | |||||| |||| Sbjct 538 CAGTCTCCGTCTGCTTCTACGCGCTGCATGAAGAGGTCTGGGATCCACAGGCCGTA 483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476482580510040