Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq17042 93.3 5e-14 >seq17042 Length=860 Score = 93.3 bits (102), Expect = 5e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || ||| ||||| || |||||| ||| || ||||| |||||||| || Sbjct 497 GGCAAAGTCTGTGTGCAGACCTTCATCACGGCTGATAAGCTCATTGCTGAAGCACAAGCC 556 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 ||||| | ||| |||||||| | ||| || || ||||| || |||| ||||||||| Sbjct 557 AGGCATCATACCACGCTTCTTGAGCCAAAAGATAGCACAGAAGCTGCCACTGAAGAAGAT 616 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAA 130193 || || || || || || | | ||||||||||| | | || || | ||||| Sbjct 617 ACCTTCTACTGCAGCAAAGGCCACCAATCGCTCAGCAAA-GCTTGCTACCTTCTCATCAA 675 Query 130194 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCT 130241 ||||| ||| ||||| ||||| || | ||| ||||| |||| Sbjct 676 ACCACCTCAGTGCCCAGCTTGCCTTCTTGGTCACACAAGGGACAGTCT 723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618268307530840