Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= NC_030953.1 Length=170650 Score E Sequences producing significant alignments: (Bits) Value seq13161 82.4 8e-11 seq13160 82.4 8e-11 seq13159 82.4 8e-11 >seq13161 Length=3939 Score = 82.4 bits (90), Expect = 8e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 91446 CCATTACGCACATTAAACTGATAGAACATATGACAAGGCGGTAATGCCATCTGCTTGAGT 91505 |||||| |||| |||||| ||||||||||||| || || |||||||| | | || Sbjct 541 CCATTAGCAACATAGAACTGACAGAACATATGACATGGTGGCAATGCCATTTTATCTAGA 600 Query 91506 TCAGCTGGATTCCATGCTGAAACAATTTGACGTCTATC 91543 |||| ||||||||||||||| || || ||||||||| Sbjct 601 TCAGATGGATTCCATGCTGACACTATGATACGTCTATC 638 >seq13160 Length=3470 Score = 82.4 bits (90), Expect = 8e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 91446 CCATTACGCACATTAAACTGATAGAACATATGACAAGGCGGTAATGCCATCTGCTTGAGT 91505 |||||| |||| |||||| ||||||||||||| || || |||||||| | | || Sbjct 1979 CCATTAGCAACATAGAACTGACAGAACATATGACATGGTGGCAATGCCATTTTATCTAGA 1920 Query 91506 TCAGCTGGATTCCATGCTGAAACAATTTGACGTCTATC 91543 |||| ||||||||||||||| || || ||||||||| Sbjct 1919 TCAGATGGATTCCATGCTGACACTATGATACGTCTATC 1882 >seq13159 Length=3473 Score = 82.4 bits (90), Expect = 8e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 91446 CCATTACGCACATTAAACTGATAGAACATATGACAAGGCGGTAATGCCATCTGCTTGAGT 91505 |||||| |||| |||||| ||||||||||||| || || |||||||| | | || Sbjct 1979 CCATTAGCAACATAGAACTGACAGAACATATGACATGGTGGCAATGCCATTTTATCTAGA 1920 Query 91506 TCAGCTGGATTCCATGCTGAAACAATTTGACGTCTATC 91543 |||| ||||||||||||||| || || ||||||||| Sbjct 1919 TCAGATGGATTCCATGCTGACACTATGATACGTCTATC 1882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545804668028400