Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= NC_031030.1 Length=170788 Score E Sequences producing significant alignments: (Bits) Value seq13161 89.7 6e-13 seq13160 89.7 6e-13 seq13159 89.7 6e-13 >seq13161 Length=3939 Score = 89.7 bits (98), Expect = 6e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 141376 ACCATTACGCACATTAAACTGATAGAACATATGACAGGGTGGTAATGCCATTTGATTGAT 141435 ||||||| |||| |||||| ||||||||||||| ||||| |||||||||| || | Sbjct 540 ACCATTAGCAACATAGAACTGACAGAACATATGACATGGTGGCAATGCCATTTTATCTAG 599 Query 141436 TTCAGCTGGATTCCATGCTGAAACGATTTGACGTCGATC 141474 |||| ||||||||||||||| || || ||||| ||| Sbjct 600 ATCAGATGGATTCCATGCTGACACTATGATACGTCTATC 638 >seq13160 Length=3470 Score = 89.7 bits (98), Expect = 6e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 141376 ACCATTACGCACATTAAACTGATAGAACATATGACAGGGTGGTAATGCCATTTGATTGAT 141435 ||||||| |||| |||||| ||||||||||||| ||||| |||||||||| || | Sbjct 1980 ACCATTAGCAACATAGAACTGACAGAACATATGACATGGTGGCAATGCCATTTTATCTAG 1921 Query 141436 TTCAGCTGGATTCCATGCTGAAACGATTTGACGTCGATC 141474 |||| ||||||||||||||| || || ||||| ||| Sbjct 1920 ATCAGATGGATTCCATGCTGACACTATGATACGTCTATC 1882 >seq13159 Length=3473 Score = 89.7 bits (98), Expect = 6e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 141376 ACCATTACGCACATTAAACTGATAGAACATATGACAGGGTGGTAATGCCATTTGATTGAT 141435 ||||||| |||| |||||| ||||||||||||| ||||| |||||||||| || | Sbjct 1980 ACCATTAGCAACATAGAACTGACAGAACATATGACATGGTGGCAATGCCATTTTATCTAG 1921 Query 141436 TTCAGCTGGATTCCATGCTGAAACGATTTGACGTCGATC 141474 |||| ||||||||||||||| || || ||||| ||| Sbjct 1920 ATCAGATGGATTCCATGCTGACACTATGATACGTCTATC 1882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546246148857120