Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq17042 95.1 2e-14 >seq17042 Length=860 Score = 95.1 bits (104), Expect = 2e-14 Identities = 194/286 (68%), Gaps = 7/286 (2%) Strand=Plus/Plus Query 46690 CCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAAT 46749 |||||||| | |||||||| ||||||||||| ||||| ||| ||| ||||| Sbjct 555 CCAGGCATCATACCACGCTTCTTGAGCCAAAAGATAGCACAGAAGCTGCCACTGAAGAAG 614 Query 46750 ATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATT---ATGA 46806 || |||||||| || || || || || | || ||| | | || || | || || | Sbjct 615 ATACCTTCTACTGCAGCAAAGGCCACCAATCGCTCAGCAAAGCTTGCTACCTTCTCATCA 674 Query 46807 ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTA 46866 | |||||| | ||||| ||||| || | |||||||| | || || |||||||| Sbjct 675 AACCACCTCAGTGCCCAGCTTGCCTTCTTGGTCACACAAGGGACAGTCTCAATAGCATTG 734 Query 46867 AAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTA--AAAGACTATACA 46924 || || | | || ||| | || || || ||| || || | | ||| || || Sbjct 735 AACAGCTTGCTCTTCTCAGTGTTGTCCTTGACCAGTGTGTCAATCAGCAGAGAGTACACC 794 Query 46925 TTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACA 46970 | ||| || |||||||||||||| ||||| || ||||| || || Sbjct 795 TCGCTG--TGGATGTTTTCAATAGCAATCTGGAAGCCGTAGAAGCA 838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712742005740480