Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020
15-10-27] 9,283 sequences; 70,257,463 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq478 95.1 1e-14
>seq478
Length=29740
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031
|||| || || || || |||| ||| |||||||||||||| || ||||||| || ||
Sbjct 15404 ATGGCGCTGCCGCCGTGCCACATGTTCTGTCAGTTTTACGTAGCTGACGGTGAGTTGTCG 15463
Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091
||||| | |||||| | || | || ||||| || || || || ||||| || || |
Sbjct 15464 TGCCAGATGTACCAGCGCTCAGCTGACATGGGGCTCGGCGTCCCATTCAATATCGCCAGC 15523
Query 19092 TATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAATT 19151
|| || || || || | |||| || || || |||| | ||| |||| || || |||
Sbjct 15524 TACGCGCTGCTAACGCGCTTAGTGGCACAGGTGGCAGGTTTGAAACCCGGCGAGTTTATT 15583
Query 19152 CATACAATGGGGGATGCACATATTTACTTGAATCA 19186
||| || || || || ||| | || |||| ||
Sbjct 15584 CATGTCATTGGTGACGCGCATGTGTATCTGAACCA 15618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399458801490735
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |