Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq478 95.1 1e-14 >seq478 Length=29740 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031 |||| || || || || |||| ||| |||||||||||||| || ||||||| || || Sbjct 15404 ATGGCGCTGCCGCCGTGCCACATGTTCTGTCAGTTTTACGTAGCTGACGGTGAGTTGTCG 15463 Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091 ||||| | |||||| | || | || ||||| || || || || ||||| || || | Sbjct 15464 TGCCAGATGTACCAGCGCTCAGCTGACATGGGGCTCGGCGTCCCATTCAATATCGCCAGC 15523 Query 19092 TATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAATT 19151 || || || || || | |||| || || || |||| | ||| |||| || || ||| Sbjct 15524 TACGCGCTGCTAACGCGCTTAGTGGCACAGGTGGCAGGTTTGAAACCCGGCGAGTTTATT 15583 Query 19152 CATACAATGGGGGATGCACATATTTACTTGAATCA 19186 ||| || || || || ||| | || |||| || Sbjct 15584 CATGTCATTGGTGACGCGCATGTGTATCTGAACCA 15618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399458801490735