Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020
15-10-27] 9,283 sequences; 70,257,463 total letters
Query= NC_003356.1
Length=42575
Score E
Sequences producing significant alignments: (Bits) Value
seq7973 123 7e-24
>seq7973
Length=1071
Score = 123 bits (136), Expect = 7e-24
Identities = 130/171 (76%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 15112 ATATCAAATATTGGTTCATTTGGTGAGAATGTATATAAAGTTGGTATGACTCGACGTCTG 15171
|| ||||| || ||||| |||||||| |||| || || |||| |||||||| || ||
Sbjct 473 ATCTCAAACATCGGTTCCTTTGGTGAAGATGTCTACAAGATTGGAATGACTCGTCGCCTC 414
Query 15172 GAACCAATGGATAGAGTTAAAGAATTGGGTGATGCATCTGTACCATTTGATTTTGATGTG 15231
|| || |||||| |||| |||||| | || ||||||||||| || ||| ||||||||
Sbjct 413 GATCCCATGGATCGAGTCAAAGAACTCGGAGATGCATCTGTTCCCTTTTCATTTGATGTT 354
Query 15232 CATGCCATGATTTCCTGCGATGATGCTCCAGCTTTGGAAAAAGCATTACAT 15282
||||| ||||| | | | |||||||||| || ||||| || |||||
Sbjct 353 CATGCAATGATATATTCTCAAAATGCTCCAGCATTAGAAAATGCCCTACAT 303
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 136103394903102
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |