Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq69 96.9 3e-15 >seq69 Length=63067 Score = 96.9 bits (106), Expect = 3e-15 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 52894 GGCATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATG 52953 ||||||||| || | | |||||| ||||||| |||||||| |||||| | |||||| Sbjct 13226 GGCATGAACTCGGCGCTCATGTGCCAGTACATTGAGTTTGTAGCGGACCGCCTGTTGTAC 13285 Query 52954 CAGCTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATA 53013 |||||| | |||| | |||| ||||| ||| | ||| ||| || Sbjct 13286 TCGCTCGGCGTGTCGAAGATTTTCCATGCAAAGAACCCATTTGACTGGATGGACATGATC 13345 Query 53014 TCGCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 ||||| ||||||| || ||||||||||||| ||||||||||||||| Sbjct 13346 TCGCTTCAGGGCAAGACGAACTTTTTCGAGAAGCGTGTGGGCGAGTAC 13393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496006437973600