Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_004688.1 Length=110865 Score E Sequences producing significant alignments: (Bits) Value seq4659 105 5e-18 >seq4659 Length=1816 Score = 105 bits (116), Expect = 5e-18 Identities = 140/190 (74%), Gaps = 7/190 (4%) Strand=Plus/Plus Query 99369 CGACAGCCGCGAGGGCACGTTGCTCTTGATGAGGCCCGTCACCACATCCACGGAGGGCCG 99428 ||||| |||| ||||||||| || || ||||| || | ||||||||| ||||| || Sbjct 396 CGACA--CGCGTCGGCACGTTGGCTTTAATCAGGCCAGTGATCACATCCACCGAGGGACG 453 Query 99429 CTGCGTCGCCAGGACGAGATGAATGCCGGCCGCACGCGCCTTCTGCGCGATGCGGACAAT 99488 ||| || |||| || | ||||||||||| |||||| || || ||||| | ||| ||| Sbjct 454 CTGGGTGGCCAATACCAAATGAATGCCGGACGCACGGGCTTTTTGCGCCAGGCGCGCAA- 512 Query 99489 GTTGGCCTCAACCTCTTTCTTG-TAGCCACCCATCATGAGATCAGCGAGTTCATCCACCA 99547 | ||| || |||||||| | ||| ||||||| ||||| || || ||||| | | Sbjct 513 --TCAGCTCCTCCACTTTCTTGCCAACCA-CCATCATCAGATCCGCCAGCTCATCGATGA 569 Query 99548 CTACCACGAT 99557 | ||||| || Sbjct 570 CCACCACAAT 579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354603076887438