Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_010116.1 Length=58663 Score E Sequences producing significant alignments: (Bits) Value seq4021 98.7 4e-16 >seq4021 Length=2253 Score = 98.7 bits (108), Expect = 4e-16 Identities = 100/128 (78%), Gaps = 2/128 (2%) Strand=Plus/Minus Query 6641 ATCGAC-GCGATCAACCGCATGAACAACCTCTGGTACTGCGAGACCATCGCCGCCACGAA 6699 |||||| ||| ||||| ||||||||| ||||| |||||| | |||| |||||| || Sbjct 1571 ATCGACCGCG-TCAACGAAATGAACAACAACTGGTTCTGCGAAAACATCCGCGCCACCAA 1513 Query 6700 CCCCTGCGGTGAGCAACCGCTCCCGCCCTACGGTGCCTGCTTGTTGGGCTCCTTCAACCT 6759 ||| |||||||||||||| | || || || || |||||| || | || ||| ||||||| Sbjct 1512 CCCATGCGGTGAGCAACCCTTGCCACCTTATGGCGCCTGCCTGCTCGGTTCCGTCAACCT 1453 Query 6760 GGTCAAGT 6767 | ||||| Sbjct 1452 GACCAAGT 1445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187579319796750