Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020
15-10-27] 9,283 sequences; 70,257,463 total letters
Query= NC_015265.1
Length=37236
Score E
Sequences producing significant alignments: (Bits) Value
seq6744 163 7e-36
>seq6744
Length=1221
Score = 163 bits (180), Expect = 7e-36
Identities = 207/278 (74%), Gaps = 10/278 (4%)
Strand=Plus/Minus
Query 9480 GGCACGCTGGTGGATGCGACGATCTTCGAGGCTGCGCCG---TCCACGAAGAACGCCGG- 9535
|||||| |||||||||| ||| | ||| ||||||| || || ||||||||| |
Sbjct 389 GGCACGGTGGTGGATGCCACGCTGATCG---CTGCGCCCAGCTCGACCAAGAACGCCAGC 333
Query 9536 GAAGAGCCGTGACCCGGAGATGCATCAGACGAAGAAGGGCAACGACTGGTATTTCGGCAT 9595
| ||| ||||||| ||||||||||||| ||||||||| | | ||||||||||||||
Sbjct 332 GGCCAGC-GTGACCCCGAGATGCATCAGAGCAAGAAGGGCCAACAGTGGTATTTCGGCAT 274
Query 9596 GAAGGCCCATGTCGGCGTCGACGCCGACTCGGGTCTGGTGCATAGCGTGGTCACCACGGC 9655
|||||||||| |||| || ||||| | |||||||||||||| | ||| | ||||||
Sbjct 273 GAAGGCCCATATCGGTGTGGACGCTCAATCGGGTCTGGTGCACACGGTGCGCGGCACGGC 214
Query 9656 GGCCAACGAGCCGGACGTATCGCAGGCCCACGCCCTGCTGCACGGTCATGAGCAGGA-AG 9714
|| ||||| || || | ||||| |||| |||||||| ||||| ||| || | |
Sbjct 213 GGGCAACGTCAACGATGTGACCGAGGCCAACGCGCTGCTGCATGGTCAGGAG-AGCAGCG 155
Query 9715 CGTTTGGCGATGCGGGCTACACCGGCGTGGACAAGCGC 9752
| | ||| ||||| || || |||| ||||| |||
Sbjct 154 CCTATGGTGATGCTGGGTATCAGGGCGCAGACAAACGC 117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 119020478256708
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |