Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020
15-10-27] 9,283 sequences; 70,257,463 total letters
Query= NC_016650.1
Length=48072
Score E
Sequences producing significant alignments: (Bits) Value
seq3827 86.0 2e-12
>seq3827
Length=3624
Score = 86.0 bits (94), Expect = 2e-12
Identities = 61/70 (87%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 46650 TAGCTCAATTGGTAGAGCACCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTCCCTCCG 46709
||||||||||||||||| | ||||||||||| ||| ||||||||||||||| |||||
Sbjct 1271 TAGCTCAATTGGTAGAGTATCGGTCTCCAAAACCGAGGGTTGGGGGTTCGAGACCCTCTT 1330
Query 46710 GGCCTGCAAA 46719
||||||| ||
Sbjct 1331 GGCCTGCCAA 1340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 153691855814364
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |