Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq69 100 3e-16 >seq69 Length=63067 Score = 100 bits (110), Expect = 3e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 37440 TCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCT 37499 ||| | || || || ||||| || | ||| | ||| ||||| || |||||||| || Sbjct 12843 TCTTTAATGTACGTGTCAATGAGCAGCGAATAGACTTCCGAGTGGATGTTTTCAATCGCG 12784 Query 37500 ATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTA 37559 ||||| || |||||||| |||| |||||| | | ||| || || || ||| || | Sbjct 12783 ATCTGGAAGCCATAAAAGCACCGAGCTTCCGGCACTTGCACTTCATTGCTAAAGTTCATG 12724 Query 37560 GCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATA 37619 || | || || || || || |||||||| ||||||||||| || || |||| || ||| Sbjct 12723 GCCAGATTCTCGTTCACAATGCCATCACTGGCTGCAAAGAAGGCGAGCACATGCTTGATA 12664 Query 37620 AAATGTCTTTCAT 37632 || || | |||| Sbjct 12663 AAGTGACGCTCAT 12651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592248069039320