Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_019538.1 Length=231743 Score E Sequences producing significant alignments: (Bits) Value seq5988 87.8 3e-12 >seq5988 Length=1363 Score = 87.8 bits (96), Expect = 3e-12 Identities = 67/78 (86%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 199781 TCGGTGATTAGCGCAGT-TGGTAGCGCGTCTGGTTTGGGACCAGAGGGTCACAGGTTCGA 199839 |||| | ||||||||| ||||||||| |||||||||||||||||||||| |||||||| Sbjct 1271 TCGGGGTATAGCGCAGTCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGAAGGTTCGA 1330 Query 199840 GTCCTGTATCACCGACCA 199857 |||| | ||||||||| Sbjct 1331 ATCCTTTCACACCGACCA 1348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741363564042040