Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020
15-10-27] 9,283 sequences; 70,257,463 total letters
Query= NC_019913.1
Length=91715
Score E
Sequences producing significant alignments: (Bits) Value
seq6517 96.9 2e-15
>seq6517
Length=1260
Score = 96.9 bits (106), Expect = 2e-15
Identities = 141/199 (71%), Gaps = 3/199 (2%)
Strand=Plus/Plus
Query 6926 CCTTTAGCCGACTTCTTCTTACT---GTCAGTCTTAGGGTCTTTGAAGATTGCAATGCCT 6982
||||| ||||| ||||| | | ||| || ||||||||||| | || | | |||
Sbjct 119 CCTTTGGCCGATTTCTTGGTGCCATCGTCTGTAATAGGGTCTTTGTATATCTCTCTACCT 178
Query 6983 TCTCCGTTCACCTCAGTGTAAGTGGCTTTCACTGCGAACCCGAAGGTGTCTCGGGTATTG 7042
|| ||||| || || ||||||||||||| || || |||||||| || |||||||||
Sbjct 179 TCGCCGTTTACTTCTCCATAAGTGGCTTTCATGGCAAAGCCGAAGGTATCACGGGTATTG 238
Query 7043 CACTGATAGGTGTAACTACCAACTCCGAAGACCACGTTCAAGGATGCGAAACCTTTCTGC 7102
| ||||| || || ||||| || | || || || || || || ||||| |||
Sbjct 239 TATTGATAAGTATATGAGCCAACGCCTAGCACAACATTGGTAGAGGCAAAGCCTTTTTGC 298
Query 7103 TTCAAGCGTTCCAAGATTT 7121
|| || ||||| ||||||
Sbjct 299 TTTAATCGTTCACAGATTT 317
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 293330009895988
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |