Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_019913.1 Length=91715 Score E Sequences producing significant alignments: (Bits) Value seq6517 96.9 2e-15 >seq6517 Length=1260 Score = 96.9 bits (106), Expect = 2e-15 Identities = 141/199 (71%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 6926 CCTTTAGCCGACTTCTTCTTACT---GTCAGTCTTAGGGTCTTTGAAGATTGCAATGCCT 6982 ||||| ||||| ||||| | | ||| || ||||||||||| | || | | ||| Sbjct 119 CCTTTGGCCGATTTCTTGGTGCCATCGTCTGTAATAGGGTCTTTGTATATCTCTCTACCT 178 Query 6983 TCTCCGTTCACCTCAGTGTAAGTGGCTTTCACTGCGAACCCGAAGGTGTCTCGGGTATTG 7042 || ||||| || || ||||||||||||| || || |||||||| || ||||||||| Sbjct 179 TCGCCGTTTACTTCTCCATAAGTGGCTTTCATGGCAAAGCCGAAGGTATCACGGGTATTG 238 Query 7043 CACTGATAGGTGTAACTACCAACTCCGAAGACCACGTTCAAGGATGCGAAACCTTTCTGC 7102 | ||||| || || ||||| || | || || || || || || ||||| ||| Sbjct 239 TATTGATAAGTATATGAGCCAACGCCTAGCACAACATTGGTAGAGGCAAAGCCTTTTTGC 298 Query 7103 TTCAAGCGTTCCAAGATTT 7121 || || ||||| |||||| Sbjct 299 TTTAATCGTTCACAGATTT 317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 293330009895988