Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq1773 145 1e-29 >seq1773 Length=8977 Score = 145 bits (160), Expect = 1e-29 Identities = 190/263 (72%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 122405 GGGCACGAAAAAGCAGACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATG 122464 ||||| | ||| |||||||||| ||||||||||| | || |||| ||| || ||| Sbjct 8164 GGGCATGTTAAAACAGACCGTACCGGCACGGGCACTATTTCTGTATTTGGCTACCAGATG 8223 Query 122465 CGCTTTGACCTGCAAAAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCC 122524 |||||||||||| |||| ||||| | |||| |||||||| || || ||| || Sbjct 8224 CGCTTTGACCTGGCTGAAGGGTTCCCCTTACTCACCACCAAAAAAGTCCATCTCAAGTCG 8283 Query 122525 ATCATCCATGAGCTTCTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGAC 122584 ||||| || || | || |||||| | |||| |||||| || ||||| || || Sbjct 8284 ATCATTCACGAATTGCTCTGGTTCTTGCAGGGCAGTACCAATATTGCATATCTCAAGGAA 8343 Query 122585 AACAACGTCAGTATCTGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTAC 122644 ||| |||||| || |||||||| |||||||||| || || || || || || ||||| Sbjct 8344 AACGGCGTCAGCATTTGGGATGAGTGGGCAGATGCCGAAGGCAACCTTGGTCCAGTGTAT 8403 Query 122645 GGTAAGCAATGGCGTGAGTGGCC 122667 || | || ||||| | ||||| Sbjct 8404 GGCTACCAGTGGCGCAACTGGCC 8426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777541765526800