Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq3915 86.0 8e-12 >seq3915 Length=2367 Score = 86.0 bits (94), Expect = 8e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 116025 TCATCACGAGCAATCAGACCGATGATCTTTGCATTGCCTTCCATCATCTTGAGTTCACCA 116084 || ||||| ||||| || | ||||||||| |||||||||||||||| |||| | || || Sbjct 374 TCGTCACGCGCAATGAGGCGGATGATCTTGGCATTGCCTTCCATCACCTTGCGCTCGGCA 433 Query 116085 AAAGCAAACGAGCAAGCGAAAGAAACATAGAAACGAATACCCTCAAGGATATACACATTC 116144 || || |||||||| || || || || || || || | || ||||||| || ||| Sbjct 434 AACGCGAACGAGCAGGCAAAGCTGACGTAAAAGCGGATGGCTTCGAGGATATTGACGTTC 493 Query 116145 AT 116146 || Sbjct 494 AT 495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633440088665640