Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020
15-10-27] 9,283 sequences; 70,257,463 total letters
Query= NC_021529.2
Length=247511
Score E
Sequences producing significant alignments: (Bits) Value
seq2003 113 7e-20
>seq2003
Length=7520
Score = 113 bits (124), Expect = 7e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 63900 CCATTCTGGAAACACTTTCAGACTGCTGTGAAGTCATGTTCACAAGGTGGTGTTCGTGGT 63959
|| |||| |||| || ||| |||| ||||| || || || || || ||||| || |||
Sbjct 6902 CCGTTCTACAAACTGTTCCAGTCTGCGGTGAAATCCTGCTCGCAGGGCGGTGTGCGGGGT 6961
Query 63960 GGTGCTGCAACGCTAACTTACCCGATTTGGCATTTAGAAGTTGAAAAACTTTTGGTGCTG 64019
|| || || ||| | |||||| | ||||| | ||||| ||| ||| ||||||||
Sbjct 6962 GGGGCGGCGACGTTGTTCTACCCGTTGTGGCACCTTGAAGTCGAATCACTGCTGGTGCTG 7021
Query 64020 AAGAACAACAAAGGCGTTGAAGAAAACCGTATTCGTCATCTTGACTACAGTGTGTCTATC 64079
|| |||||| ||||| |||||||||||| | |||||||| || || | ||| |||
Sbjct 7022 AAAAACAACCGCGGCGTAGAAGAAAACCGTGTGCGTCATCTCGATTATGGCGTGCAGATC 7081
Query 64080 AGTCGCTTGATG 64091
| ||| |||||
Sbjct 7082 AACCGCCTGATG 7093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 791815309068280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |