Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_021529.2 Length=247511 Score E Sequences producing significant alignments: (Bits) Value seq2003 113 7e-20 >seq2003 Length=7520 Score = 113 bits (124), Expect = 7e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 63900 CCATTCTGGAAACACTTTCAGACTGCTGTGAAGTCATGTTCACAAGGTGGTGTTCGTGGT 63959 || |||| |||| || ||| |||| ||||| || || || || || ||||| || ||| Sbjct 6902 CCGTTCTACAAACTGTTCCAGTCTGCGGTGAAATCCTGCTCGCAGGGCGGTGTGCGGGGT 6961 Query 63960 GGTGCTGCAACGCTAACTTACCCGATTTGGCATTTAGAAGTTGAAAAACTTTTGGTGCTG 64019 || || || ||| | |||||| | ||||| | ||||| ||| ||| |||||||| Sbjct 6962 GGGGCGGCGACGTTGTTCTACCCGTTGTGGCACCTTGAAGTCGAATCACTGCTGGTGCTG 7021 Query 64020 AAGAACAACAAAGGCGTTGAAGAAAACCGTATTCGTCATCTTGACTACAGTGTGTCTATC 64079 || |||||| ||||| |||||||||||| | |||||||| || || | ||| ||| Sbjct 7022 AAAAACAACCGCGGCGTAGAAGAAAACCGTGTGCGTCATCTCGATTATGGCGTGCAGATC 7081 Query 64080 AGTCGCTTGATG 64091 | ||| ||||| Sbjct 7082 AACCGCCTGATG 7093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 791815309068280