Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_021531.1 Length=223989 Score E Sequences producing significant alignments: (Bits) Value seq1773 100 4e-16 >seq1773 Length=8977 Score = 100 bits (110), Expect = 4e-16 Identities = 166/240 (69%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 98951 AGACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTCAACTTGCA 99010 |||||||||||| || ||||| ||||| | || ||| |||||||||| || || || Sbjct 8178 AGACCGTACCGGCACGGGCACTATTTCTGTATTTGGCTACCAGATGCGCTTTGACCTGGC 8237 Query 99011 AGAAGGTTTCCCGCTGGTAACGACCAAGCGTTGCCACCTGCGCTCTATTATCCATGAACT 99070 ||||| ||||| | | || ||||| ||| || || || || || ||| | Sbjct 8238 TGAAGGGTTCCCCTTACTCACCACCAAAAAAGTCCATCTCAAGTCGATCATTCACGAATT 8297 Query 99071 GCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGTGTAACCAT 99130 ||| |||||| || | ||| |||||||| || || || || || || || | ||| Sbjct 8298 GCTCTGGTTCTTGCAGGGCAGTACCAATATTGCATATCTCAAGGAAAACGGCGTCAGCAT 8357 Query 99131 TTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGCAGTGGCG 99190 |||||| || ||||| || | ||| |||| ||||| || || || | |||||||| Sbjct 8358 TTGGGATGAGTGGGCAGATGCCGAAGGCAACCTTGGTCCAGTGTATGGCTACCAGTGGCG 8417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716553643257320