Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020
15-10-27] 9,283 sequences; 70,257,463 total letters
Query= NC_021531.1
Length=223989
Score E
Sequences producing significant alignments: (Bits) Value
seq1773 100 4e-16
>seq1773
Length=8977
Score = 100 bits (110), Expect = 4e-16
Identities = 166/240 (69%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 98951 AGACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTCAACTTGCA 99010
|||||||||||| || ||||| ||||| | || ||| |||||||||| || || ||
Sbjct 8178 AGACCGTACCGGCACGGGCACTATTTCTGTATTTGGCTACCAGATGCGCTTTGACCTGGC 8237
Query 99011 AGAAGGTTTCCCGCTGGTAACGACCAAGCGTTGCCACCTGCGCTCTATTATCCATGAACT 99070
||||| ||||| | | || ||||| ||| || || || || || ||| |
Sbjct 8238 TGAAGGGTTCCCCTTACTCACCACCAAAAAAGTCCATCTCAAGTCGATCATTCACGAATT 8297
Query 99071 GCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGTGTAACCAT 99130
||| |||||| || | ||| |||||||| || || || || || || || | |||
Sbjct 8298 GCTCTGGTTCTTGCAGGGCAGTACCAATATTGCATATCTCAAGGAAAACGGCGTCAGCAT 8357
Query 99131 TTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGCAGTGGCG 99190
|||||| || ||||| || | ||| |||| ||||| || || || | ||||||||
Sbjct 8358 TTGGGATGAGTGGGCAGATGCCGAAGGCAACCTTGGTCCAGTGTATGGCTACCAGTGGCG 8417
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716553643257320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |